Variant report

Variant	rs17111459
Chromosome Location	chr10:97976495-97976496
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs12266223	1.00[CEU][hapmap]
rs17111457	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17232052	1.00[CEU][hapmap];0.87[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97948200-97979000	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr10:97949600-97989200	Strong transcription	Liver	Liver
3	chr10:97952000-98010200	Weak transcription	Fetal Kidney	kidney
4	chr10:97957600-97988400	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr10:97959000-97988800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
6	chr10:97961000-97985600	Weak transcription	Aorta	Aorta
7	chr10:97964000-97985800	Weak transcription	Stomach Mucosa	stomach
8	chr10:97965800-97998600	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr10:97967200-97977000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr10:97967400-97981000	Weak transcription	Colonic Mucosa	Colon
11	chr10:97967600-97990600	Weak transcription	Rectal Smooth Muscle	rectum
12	chr10:97971000-97977000	Strong transcription	Rectal Mucosa Donor 29	rectum
13	chr10:97971200-97986400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr10:97972200-97987600	Strong transcription	Duodenum Mucosa	Duodenum
15	chr10:97972400-97989600	Strong transcription	Primary B cells from cord blood	blood
16	chr10:97972600-97982400	Weak transcription	Thymus	Thymus
17	chr10:97972600-97989200	Strong transcription	GM12878-XiMat	blood
18	chr10:97973000-97977000	Strong transcription	Rectal Mucosa Donor 31	rectum
19	chr10:97973200-97976800	Strong transcription	Placenta	Placenta
20	chr10:97973400-97989200	Strong transcription	Primary B cells from peripheral blood	blood
21	chr10:97974600-97980600	Weak transcription	Esophagus	oesophagus
22	chr10:97974800-97981400	Weak transcription	Gastric	stomach
23	chr10:97975000-97981000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
24	chr10:97975000-97981000	Weak transcription	Pancreas	Pancrea
25	chr10:97975000-97982800	Weak transcription	Fetal Stomach	stomach
26	chr10:97975000-97989600	Weak transcription	Lung	lung
27	chr10:97976000-97978200	Weak transcription	Fetal Intestine Small	intestine
28	chr10:97976400-97978800	Weak transcription	Fetal Intestine Large	intestine
29	chr10:97976400-97981400	Weak transcription	Spleen	Spleen

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