Variant report

Variant	rs17121523
Chromosome Location	chr1:61482640-61482641
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:61475105..61478229-chr1:61481124..61483479,4	K562	blood:

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11590404	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs12402756	0.81[YRI][hapmap]
rs12562156	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs12566542	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12566978	0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs12567293	0.81[ASW][hapmap];0.81[GIH][hapmap];0.92[JPT][hapmap];0.90[MEX][hapmap];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12567823	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs12568978	1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2173345	1.00[CHB][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.98[ASN][1000 genomes]
rs58094234	1.00[EUR][1000 genomes]
rs58125235	1.00[EUR][1000 genomes]
rs59565019	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs59688406	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs6668746	0.94[CHB][hapmap];0.92[JPT][hapmap]
rs6669064	1.00[EUR][1000 genomes]
rs6684207	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs6695548	0.85[JPT][hapmap];0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7550247	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs7555539	1.00[EUR][1000 genomes]
rs924275	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9787291	0.94[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:61479600-61483600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr1:61480200-61491400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:61480400-61483400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr1:61482000-61489800	Weak transcription	K562	blood

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