The 2.0 version of rSNPBase

Variant report

Variant rs17127801
Chromosome Location chr14:55183314-55183315
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55153000-55197000 Weak transcription H9 Cell Line embryonic stem cell
2 chr14:55165800-55239200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr14:55166600-55195600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr14:55168800-55189200 Weak transcription A549 lung
5 chr14:55169400-55183600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr14:55169400-55186400 Weak transcription Pancreas Pancrea
7 chr14:55169800-55184600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
8 chr14:55170200-55203800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr14:55170400-55203400 Weak transcription NHEK skin
10 chr14:55174800-55194400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr14:55179600-55183600 Enhancers Adipose Nuclei Adipose
12 chr14:55179600-55184200 Weak transcription HepG2 liver
13 chr14:55179600-55186200 Weak transcription Lung lung
14 chr14:55179600-55186400 Enhancers Skeletal Muscle Male skeletal muscle
15 chr14:55179600-55201600 Weak transcription Fetal Muscle Trunk muscle
16 chr14:55179800-55187000 Weak transcription HUVEC blood vessel
17 chr14:55180200-55184000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr14:55180200-55184800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr14:55180200-55184800 Weak transcription Right Atrium heart
20 chr14:55180200-55186000 Weak transcription Aorta Aorta
21 chr14:55180200-55192600 Enhancers Fetal Heart heart
22 chr14:55180400-55183600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr14:55180400-55184600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr14:55180400-55184800 Weak transcription Left Ventricle heart
25 chr14:55180400-55185600 Weak transcription Brain Hippocampus Middle brain
26 chr14:55180400-55185800 Weak transcription Right Ventricle heart
27 chr14:55180400-55186200 Weak transcription Brain Cingulate Gyrus brain
28 chr14:55180400-55194600 Weak transcription Muscle Satellite Cultured Cells --
29 chr14:55180600-55183600 Weak transcription Colon Smooth Muscle Colon
30 chr14:55180600-55184600 Weak transcription Fetal Lung lung
31 chr14:55180600-55185000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr14:55180600-55194200 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr14:55181000-55186600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
34 chr14:55181000-55188000 Enhancers Liver Liver
35 chr14:55181200-55198400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr14:55182000-55184800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr14:55182200-55183600 Weak transcription Psoas Muscle Psoas
38 chr14:55182200-55184400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr14:55182200-55184800 Weak transcription Fetal Stomach stomach
40 chr14:55182200-55185600 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr14:55182200-55185800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr14:55182200-55187200 Weak transcription Small Intestine intestine
43 chr14:55182200-55196800 Weak transcription HSMMtube muscle
44 chr14:55182400-55194400 Weak transcription Fetal Muscle Leg muscle
45 chr14:55182600-55183600 Weak transcription NHDF-Ad bronchial
46 chr14:55182600-55184800 Weak transcription Stomach Smooth Muscle stomach
47 chr14:55182600-55186200 Weak transcription Brain Substantia Nigra brain
48 chr14:55182800-55183600 Weak transcription NHLF lung
49 chr14:55182800-55189000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr14:55183000-55183600 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015