Variant report

Variant	rs17131446
Chromosome Location	chr1:91914658-91914659
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1046622	1.00[CEU][hapmap]
rs13447460	1.00[CEU][hapmap]
rs13447492	1.00[CHB][hapmap]
rs13447510	1.00[CEU][hapmap]
rs17131455	0.98[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs17131461	0.92[EUR][1000 genomes]
rs17131469	1.00[EUR][1000 genomes]
rs17500068	1.00[EUR][1000 genomes]
rs17559566	1.00[EUR][1000 genomes]
rs282009	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949516	chr1:91644418-92109261	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	nsv1009560	chr1:91897078-92270781	Enhancers Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
3	nsv1005574	chr1:91913621-91923934	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
4	esv3503737	chr1:91913728-91916145	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
5	esv6603	chr1:91913833-91914816	Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv3503736	chr1:91913996-91914659	Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv3503732	chr1:91914007-91914659	Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3976	chr1:91914042-91914682	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:91914600-91916000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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