Variant report

Variant	rs17132707
Chromosome Location	chr11:73809278-73809279
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:73802596..73805721-chr11:73808756..73811931,3	MCF-7	breast:
2	chr11:73809038..73811492-chr11:73813000..73815534,2	K562	blood:
3	chr11:73808269..73810850-chr11:73816253..73818234,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs12417424	1.00[CHB][hapmap]
rs17310472	1.00[CHB][hapmap]
rs72984839	1.00[AFR][1000 genomes]
rs72984861	1.00[AFR][1000 genomes];0.92[EUR][1000 genomes]
rs72984889	1.00[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs72986741	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv492091	chr11:73285970-73844424	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	85 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs17132707	UCP2	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:73777600-73818600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr11:73781800-73849200	Weak transcription	Stomach Mucosa	stomach
3	chr11:73782600-73823800	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr11:73785600-73823600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr11:73787800-73811400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr11:73794600-73823600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr11:73795000-73817400	Strong transcription	Primary neutrophils fromperipheralblood	blood
8	chr11:73795000-73817600	Strong transcription	Primary B cells from cord blood	blood
9	chr11:73795200-73814600	Strong transcription	Fetal Muscle Trunk	muscle
10	chr11:73795200-73814600	Strong transcription	Left Ventricle	heart
11	chr11:73795200-73814800	Strong transcription	Liver	Liver
12	chr11:73795200-73815200	Strong transcription	Rectal Mucosa Donor 31	rectum
13	chr11:73795200-73817600	Strong transcription	Primary T cells from cord blood	blood
14	chr11:73795200-73817600	Strong transcription	Primary T cells fromperipheralblood	blood
15	chr11:73795200-73818200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
16	chr11:73795200-73820600	Strong transcription	Primary T helper cells fromperipheralblood	blood
17	chr11:73795200-73823800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
18	chr11:73795400-73817800	Strong transcription	Primary B cells from peripheral blood	blood
19	chr11:73795800-73815000	Strong transcription	Duodenum Smooth Muscle	Duodenum
20	chr11:73795800-73817800	Strong transcription	Monocytes-CD14+_RO01746	blood
21	chr11:73796000-73817800	Strong transcription	HSMM	muscle
22	chr11:73797000-73812600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr11:73797000-73813600	Weak transcription	Placenta Amnion	Placenta Amnion
24	chr11:73797200-73812600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
25	chr11:73797200-73817600	Strong transcription	Primary monocytes fromperipheralblood	blood
26	chr11:73798600-73817600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr11:73798600-73817800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr11:73800400-73817600	Strong transcription	Primary T helper cells PMA-I stimulated	--
29	chr11:73800600-73817000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chr11:73801200-73813000	Strong transcription	A549	lung
31	chr11:73801200-73817600	Strong transcription	Dnd41	blood
32	chr11:73801400-73809800	Strong transcription	Osteobl	bone
33	chr11:73801400-73817600	Strong transcription	Fetal Thymus	thymus
34	chr11:73801600-73823600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr11:73802000-73811400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr11:73802000-73811800	Weak transcription	H9 Cell Line	embryonic stem cell
37	chr11:73802000-73812800	Weak transcription	Spleen	Spleen
38	chr11:73802000-73816200	Weak transcription	Fetal Intestine Small	intestine
39	chr11:73802000-73816600	Weak transcription	Small Intestine	intestine
40	chr11:73802000-73831800	Weak transcription	Pancreas	Pancrea
41	chr11:73802200-73812600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
42	chr11:73802200-73880800	Weak transcription	Esophagus	oesophagus
43	chr11:73802400-73832000	Weak transcription	Fetal Heart	heart
44	chr11:73802600-73810000	Weak transcription	Muscle Satellite Cultured Cells	--
45	chr11:73802600-73812800	Weak transcription	Ovary	ovary
46	chr11:73802800-73813000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
47	chr11:73803200-73812400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
48	chr11:73804000-73832400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr11:73804000-73880800	Weak transcription	Aorta	Aorta
50	chr11:73804200-73810000	Weak transcription	Brain Substantia Nigra	brain

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