Variant report

Variant rs17135526
Chromosome Location chr5:112606338-112606339
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112586600-112623600 Weak transcription Pancreas Pancrea
2 chr5:112587600-112617000 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr5:112589200-112610600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr5:112600200-112618000 Weak transcription Fetal Kidney kidney
5 chr5:112600800-112607200 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr5:112600800-112607600 Enhancers HUES6 Cell Line embryonic stem cell
7 chr5:112600800-112608000 Enhancers Ovary ovary
8 chr5:112600800-112610600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr5:112600800-112610800 Enhancers iPS-18 Cell Line embryonic stem cell
10 chr5:112601000-112612400 Enhancers HUES48 Cell Line embryonic stem cell
11 chr5:112601400-112611200 Enhancers Pancreatic Islets Pancreatic Islet
12 chr5:112602200-112606600 Weak transcription Fetal Lung lung
13 chr5:112602200-112616600 Weak transcription Brain Hippocampus Middle brain
14 chr5:112602600-112609800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr5:112603000-112606800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr5:112603000-112606800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr5:112603000-112607800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr5:112603000-112608600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr5:112603000-112611800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr5:112603000-112616800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr5:112603200-112610600 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr5:112603400-112608000 Enhancers HMEC breast
23 chr5:112603400-112608200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr5:112603400-112608200 Weak transcription Adipose Nuclei Adipose
25 chr5:112603800-112612200 Enhancers iPS-15b Cell Line embryonic stem cell
26 chr5:112604000-112606800 Weak transcription Esophagus oesophagus
27 chr5:112604000-112607200 Enhancers NHEK skin
28 chr5:112604000-112607600 Enhancers H1 Cell Line embryonic stem cell
29 chr5:112604200-112609600 Weak transcription Right Ventricle heart
30 chr5:112604200-112610400 Enhancers HUES64 Cell Line embryonic stem cell
31 chr5:112604200-112610600 Weak transcription Psoas Muscle Psoas
32 chr5:112604400-112607000 Enhancers H9 Cell Line embryonic stem cell
33 chr5:112604400-112607400 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr5:112604400-112612600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr5:112604600-112612600 Enhancers Cortex derived primary cultured neurospheres brain
36 chr5:112604800-112606400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr5:112604800-112606400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr5:112605000-112607400 Enhancers Liver Liver
39 chr5:112605000-112608600 Enhancers NH-A brain
40 chr5:112605000-112609400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr5:112605000-112611400 Enhancers HUVEC blood vessel
42 chr5:112605200-112607200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr5:112605400-112606800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr5:112605400-112610400 Enhancers iPS-20b Cell Line embryonic stem cell
45 chr5:112605400-112612400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
46 chr5:112605600-112606800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr5:112605600-112608000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr5:112605800-112607600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr5:112605800-112607800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr5:112605800-112608000 Weak transcription Brain Germinal Matrix brain

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