Variant report

Variant rs17164682
Chromosome Location chr4:1346796-1346797
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:1341800-1346800 Weak transcription Aorta Aorta
2 chr4:1341800-1347000 Weak transcription Ovary ovary
3 chr4:1341800-1387800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr4:1341800-1388800 Weak transcription Small Intestine intestine
5 chr4:1342000-1351400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr4:1342200-1354200 Weak transcription NH-A brain
7 chr4:1342200-1359400 Weak transcription Right Atrium heart
8 chr4:1342200-1369800 Weak transcription HSMMtube muscle
9 chr4:1342200-1382600 Weak transcription Primary B cells from cord blood blood
10 chr4:1342400-1346800 Weak transcription Left Ventricle heart
11 chr4:1342400-1350400 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr4:1342400-1350600 Weak transcription Fetal Lung lung
13 chr4:1342400-1352600 Strong transcription NHLF lung
14 chr4:1342400-1370000 Weak transcription HSMM muscle
15 chr4:1342400-1379800 Weak transcription A549 lung
16 chr4:1342600-1349400 Weak transcription K562 blood
17 chr4:1342600-1358400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr4:1342600-1367200 Weak transcription Hela-S3 cervix
19 chr4:1342600-1385600 Weak transcription Fetal Kidney kidney
20 chr4:1342800-1353800 Weak transcription NHDF-Ad bronchial
21 chr4:1342800-1354600 Strong transcription NHEK skin
22 chr4:1342800-1360400 Weak transcription Psoas Muscle Psoas
23 chr4:1342800-1379800 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr4:1342800-1381200 Strong transcription Fetal Intestine Small intestine
25 chr4:1343000-1347800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr4:1343000-1354800 Weak transcription Primary hematopoietic stem cells blood
27 chr4:1343200-1354600 Strong transcription Fetal Stomach stomach
28 chr4:1343200-1354800 Strong transcription Sigmoid Colon Sigmoid Colon
29 chr4:1343400-1357600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr4:1343400-1381200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
31 chr4:1343600-1353400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr4:1343800-1349600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr4:1343800-1352000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr4:1344000-1358000 Weak transcription HMEC breast
35 chr4:1344200-1346800 Weak transcription Brain Germinal Matrix brain
36 chr4:1344200-1350400 Weak transcription Fetal Brain Male brain
37 chr4:1344400-1349200 Weak transcription H9 Cell Line embryonic stem cell
38 chr4:1344400-1354200 Weak transcription Brain Angular Gyrus brain
39 chr4:1344400-1364800 Weak transcription Stomach Mucosa stomach
40 chr4:1344600-1348800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr4:1344800-1348800 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr4:1345400-1346800 Genic enhancers Fetal Muscle Trunk muscle
43 chr4:1345400-1353200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr4:1345400-1356800 Strong transcription Esophagus oesophagus
45 chr4:1345600-1346800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr4:1345600-1348000 Strong transcription Rectal Mucosa Donor 31 rectum
47 chr4:1345600-1352400 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr4:1345600-1354000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr4:1345600-1354400 Strong transcription Duodenum Mucosa Duodenum
50 chr4:1345600-1354600 Strong transcription Fetal Intestine Large intestine

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