Variant report

Variant rs3749456
Chromosome Location chr4:1344228-1344229
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:1341800-1346800 Weak transcription Aorta Aorta
2 chr4:1341800-1347000 Weak transcription Ovary ovary
3 chr4:1341800-1387800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr4:1341800-1388800 Weak transcription Small Intestine intestine
5 chr4:1342000-1344400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
6 chr4:1342000-1345800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr4:1342000-1351400 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr4:1342200-1345600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr4:1342200-1346200 Weak transcription Placenta Amnion Placenta Amnion
10 chr4:1342200-1354200 Weak transcription NH-A brain
11 chr4:1342200-1359400 Weak transcription Right Atrium heart
12 chr4:1342200-1369800 Weak transcription HSMMtube muscle
13 chr4:1342200-1382600 Weak transcription Primary B cells from cord blood blood
14 chr4:1342400-1344400 Strong transcription Primary T regulatory cells fromperipheralblood blood
15 chr4:1342400-1344600 Genic enhancers Spleen Spleen
16 chr4:1342400-1345400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr4:1342400-1345400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr4:1342400-1345600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr4:1342400-1346000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr4:1342400-1346000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr4:1342400-1346200 Weak transcription Osteobl bone
22 chr4:1342400-1346800 Weak transcription Left Ventricle heart
23 chr4:1342400-1350400 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr4:1342400-1350600 Weak transcription Fetal Lung lung
25 chr4:1342400-1352600 Strong transcription NHLF lung
26 chr4:1342400-1370000 Weak transcription HSMM muscle
27 chr4:1342400-1379800 Weak transcription A549 lung
28 chr4:1342600-1344600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr4:1342600-1345400 Weak transcription Primary B cells from peripheral blood blood
30 chr4:1342600-1345400 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr4:1342600-1345400 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr4:1342600-1345400 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr4:1342600-1345800 Weak transcription Brain Anterior Caudate brain
34 chr4:1342600-1346000 Weak transcription Rectal Smooth Muscle rectum
35 chr4:1342600-1346200 Weak transcription Liver Liver
36 chr4:1342600-1349400 Weak transcription K562 blood
37 chr4:1342600-1358400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr4:1342600-1367200 Weak transcription Hela-S3 cervix
39 chr4:1342600-1385600 Weak transcription Fetal Kidney kidney
40 chr4:1342800-1344800 Genic enhancers Skeletal Muscle Male skeletal muscle
41 chr4:1342800-1345600 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr4:1342800-1346000 Weak transcription H1 Cell Line embryonic stem cell
43 chr4:1342800-1346200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr4:1342800-1346200 Weak transcription Colon Smooth Muscle Colon
45 chr4:1342800-1353800 Weak transcription NHDF-Ad bronchial
46 chr4:1342800-1354600 Strong transcription NHEK skin
47 chr4:1342800-1360400 Weak transcription Psoas Muscle Psoas
48 chr4:1342800-1379800 Weak transcription Pancreatic Islets Pancreatic Islet
49 chr4:1342800-1381200 Strong transcription Fetal Intestine Small intestine
50 chr4:1343000-1344400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

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