The 2.0 version of rSNPBase

Variant report

Variant rs17179970
Chromosome Location chr14:65155990-65155991
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:65149400-65159000 Weak transcription Right Atrium heart
2 chr14:65149400-65169400 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr14:65149600-65159200 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr14:65150200-65159000 Weak transcription Right Ventricle heart
5 chr14:65151200-65159600 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr14:65152400-65159200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr14:65152800-65159000 Weak transcription Brain Anterior Caudate brain
8 chr14:65153000-65159000 Weak transcription Brain Hippocampus Middle brain
9 chr14:65153000-65160200 Weak transcription Placenta Placenta
10 chr14:65153200-65159000 Weak transcription Brain Angular Gyrus brain
11 chr14:65153800-65156800 Enhancers Primary Natural Killer cells fromperipheralblood blood
12 chr14:65154000-65156800 Enhancers Primary T helper cells fromperipheralblood blood
13 chr14:65154200-65156000 Bivalent Enhancer Primary monocytes fromperipheralblood blood
14 chr14:65154200-65156200 Enhancers Primary neutrophils fromperipheralblood blood
15 chr14:65154200-65156400 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr14:65154200-65156800 Enhancers Primary T cells fromperipheralblood blood
17 chr14:65154400-65156000 Enhancers Primary hematopoietic stem cells blood
18 chr14:65154400-65156800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr14:65154400-65156800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr14:65154400-65156800 Enhancers Primary T helper 17 cells PMA-I stimulated --
21 chr14:65154600-65156200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr14:65154800-65156000 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
23 chr14:65154800-65156200 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr14:65154800-65156200 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr14:65154800-65156800 Enhancers Primary T helper cells PMA-I stimulated --
26 chr14:65154800-65157000 Enhancers Fetal Intestine Small intestine
27 chr14:65155000-65156000 Bivalent Enhancer Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr14:65155000-65156000 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr14:65155000-65156000 Enhancers Duodenum Mucosa Duodenum
30 chr14:65155000-65156000 Enhancers Spleen Spleen
31 chr14:65155000-65156200 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
32 chr14:65155000-65156200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr14:65155000-65156200 Enhancers HMEC breast
34 chr14:65155000-65156400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr14:65155000-65156400 Enhancers Primary T cells from cord blood blood
36 chr14:65155000-65156600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
37 chr14:65155000-65156600 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr14:65155000-65156600 Enhancers Stomach Mucosa stomach
39 chr14:65155000-65156800 Enhancers Rectal Mucosa Donor 31 rectum
40 chr14:65155000-65157000 Enhancers Fetal Intestine Large intestine
41 chr14:65155200-65156000 Enhancers Primary B cells from cord blood blood
42 chr14:65155200-65156000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr14:65155200-65156000 Enhancers Brain Inferior Temporal Lobe brain
44 chr14:65155200-65156000 Enhancers Esophagus oesophagus
45 chr14:65155200-65156000 Enhancers Pancreas Pancrea
46 chr14:65155200-65156400 Enhancers Primary T helper naive cells from peripheral blood blood
47 chr14:65155200-65156800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr14:65155400-65156800 Enhancers HepG2 liver
49 chr14:65155400-65160800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr14:65155600-65156000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015