Variant report

Variant	rs17181607
Chromosome Location	chr8:130655455-130655456
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs16904129	0.83[CHB][hapmap]
rs4487716	0.83[ASN][1000 genomes]
rs72716379	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv612230	chr8:130624121-130661901	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130652600-130656000	Weak transcription	Fetal Lung	lung
2	chr8:130654400-130656400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr8:130654600-130655800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:130654800-130656400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr8:130655000-130655800	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr8:130655200-130656800	Enhancers	Fetal Muscle Leg	muscle
7	chr8:130655400-130655600	Enhancers	Primary hematopoietic stem cells	blood
8	chr8:130655400-130656000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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