Variant report

Variant	rs17201192
Chromosome Location	chr6:31786365-31786366
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:45)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:45 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CHD2	chr6:31786223-31786974	K562	blood:	n/a	n/a
2	SIRT6	chr6:31785358-31786673	K562	blood:	n/a	n/a
3	ELK1	chr6:31786347-31786727	K562	blood:	n/a	n/a
4	MAX	chr6:31786295-31786594	K562	blood:	n/a	chr6:31786305-31786315
5	MYC	chr6:31786349-31786636	MCF10A-Er-Src	breast:	n/a	n/a
6	MXI1	chr6:31786277-31786910	Hela-S3	cervix:	n/a	n/a
7	TRIM28	chr6:31785683-31786825	K562	blood:	n/a	n/a
8	MAFF	chr6:31786213-31786721	K562	blood:	n/a	n/a
9	MAX	chr6:31785851-31787077	K562	blood:	n/a	chr6:31786305-31786315
10	SIN3AK20	chr6:31786299-31786863	PANC-1	pancreas:	n/a	n/a
11	MAX	chr6:31786328-31786828	Hela-S3	cervix:	n/a	n/a
12	CTCF	chr6:31786260-31786410	RPTEC	kidney:	n/a	n/a
13	HMGN3	chr6:31785857-31786975	K562	blood:	n/a	n/a
14	CBX3	chr6:31785975-31786823	K562	blood:	n/a	n/a
15	RCOR1	chr6:31786212-31787128	K562	blood:	n/a	n/a
16	POLR2A	chr6:31786055-31786698	Hela-S3	cervix:	n/a	n/a
17	TEAD4	chr6:31785124-31787194	K562	blood:	n/a	n/a
18	SIN3AK20	chr6:31785971-31786860	K562	blood:	n/a	n/a
19	POLR2A	chr6:31781939-31787367	K562	blood:	n/a	n/a
20	BRCA1	chr6:31786117-31786480	Hela-S3	cervix:	n/a	n/a
21	NR2F2	chr6:31781154-31786921	K562	blood:	n/a	n/a
22	KAP1	chr6:31786236-31786807	U2OS	brain:	n/a	n/a
23	RCOR1	chr6:31786357-31786851	Hela-S3	cervix:	n/a	n/a
24	MAZ	chr6:31786177-31786852	K562	blood:	n/a	chr6:31786305-31786315
25	MYC	chr6:31786324-31786642	MCF10A-Er-Src	breast:	n/a	n/a
26	POLR2A	chr6:31786355-31786689	MCF10A-Er-Src	breast:	n/a	n/a
27	TBL1XR1	chr6:31786329-31786659	K562	blood:	n/a	n/a
28	MXI1	chr6:31785471-31786783	K562	blood:	n/a	n/a
29	POLR2A	chr6:31786001-31786392	Hela-S3	cervix:	n/a	n/a
30	POLR2A	chr6:31786298-31786767	MCF10A-Er-Src	breast:	n/a	n/a
31	RPC155	chr6:31785740-31786521	Hela-S3	cervix:	n/a	n/a
32	TCF7L2	chr6:31786176-31786971	HEK293	kidney:	n/a	n/a
33	JUND	chr6:31786323-31786680	K562	blood:	n/a	n/a
34	SIN3AK20	chr6:31786160-31786887	PANC-1	pancreas:	n/a	n/a
35	MAX	chr6:31786020-31786838	A549	lung:	n/a	chr6:31786305-31786315
36	PML	chr6:31785124-31788166	K562	blood:	n/a	n/a
37	CCNT2	chr6:31785285-31786955	K562	blood:	n/a	chr6:31786312-31786321
38	EP300	chr6:31786130-31786614	K562	blood:	n/a	n/a
39	BACH1	chr6:31786297-31786686	K562	blood:	n/a	n/a
40	POLR2A	chr6:31785221-31788072	K562	blood:	n/a	n/a
41	TBL1XR1	chr6:31786193-31786814	K562	blood:	n/a	n/a
42	RCOR1	chr6:31786270-31787111	K562	blood:	n/a	n/a
43	MAX	chr6:31786255-31786709	MCF-7	breast:	n/a	chr6:31786305-31786315
44	CEBPB	chr6:31786346-31786678	K562	blood:	n/a	n/a
45	GTF2F1	chr6:31786345-31786545	K562	blood:	n/a	n/a

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:31737226..31750413-chr6:31786206..31805473,50	MCF-7	breast:
2	chr6:31508155..31511005-chr6:31784810..31787723,2	K562	blood:
3	chr6:31784980..31787962-chr6:31864437..31865939,2	K562	blood:
4	chr6:31786252..31788275-chr6:31863688..31865809,2	MCF-7	breast:
5	chr6:31618732..31620355-chr6:31785376..31787263,2	MCF-7	breast:
6	chr6:31785007..31787301-chr6:31867980..31869848,2	K562	blood:
7	chr6:31702928..31705468-chr6:31785607..31787464,2	MCF-7	breast:
8	chr6:31756951..31764627-chr6:31780500..31799197,32	MCF-7	breast:
9	chr6:31758502..31767561-chr6:31786193..31804196,52	MCF-7	breast:

No data

Variant related genes	Relation type
HSPA1L	TF binding region
ENSG00000204366	Chromatin interaction
ENSG00000204396	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000204371	Chromatin interaction
ENSG00000213719	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000204444	Chromatin interaction
ENSG00000265236	Chromatin interaction
ENSG00000204463	Chromatin interaction
ENSG00000201555	Chromatin interaction
ENSG00000166278	Chromatin interaction
ENSG00000204394	Chromatin interaction

Extended variants
information (count: 76 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs17201403	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs35595439	1.00[ASN][1000 genomes]
rs41273248	1.00[ASN][1000 genomes]
rs45484591	1.00[ASN][1000 genomes]
rs55932544	1.00[ASN][1000 genomes]
rs56061694	1.00[ASN][1000 genomes]
rs56103300	1.00[ASN][1000 genomes]
rs56119517	1.00[ASN][1000 genomes]
rs56127727	1.00[ASN][1000 genomes]
rs56188416	1.00[ASN][1000 genomes]
rs56192194	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs56229298	1.00[ASN][1000 genomes]
rs58556649	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs61740977	1.00[ASN][1000 genomes]
rs915653	1.00[ASN][1000 genomes]
rs9332704	1.00[ASN][1000 genomes]
rs9461728	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9469054	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9469058	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9469063	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9469068	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9501158	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9501159	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9501160	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:52 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601609	chr6:31280101-31799786	Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
2	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
3	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
4	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
5	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
6	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
7	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
8	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
9	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
10	nsv1033154	chr6:31550614-32009410	Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
11	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
12	esv3428142	chr6:31615800-31881809	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	257 gene(s)	inside rSNPs	diseases
13	nsv884426	chr6:31728102-31800868	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	139 gene(s)	inside rSNPs	diseases
14	nsv884427	chr6:31728102-31802465	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	152 gene(s)	inside rSNPs	diseases
15	nsv884428	chr6:31728102-31870326	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	162 gene(s)	inside rSNPs	diseases
16	nsv884429	chr6:31730356-31837066	Enhancers Transcr. at gene 5' and 3' Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	155 gene(s)	inside rSNPs	diseases
17	nsv884430	chr6:31731881-31800631	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	139 gene(s)	inside rSNPs	diseases
18	nsv462872	chr6:31778272-31864304	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
19	nsv601945	chr6:31778272-31864304	Flanking Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
20	nsv981359	chr6:31779004-31797103	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	111 gene(s)	inside rSNPs	diseases
21	nsv869989	chr6:31779203-31797657	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	114 gene(s)	inside rSNPs	diseases
22	nsv601946	chr6:31782617-31795082	Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	85 gene(s)	inside rSNPs	diseases
23	esv3344240	chr6:31783339-31795664	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	106 gene(s)	inside rSNPs	diseases
24	nsv823504	chr6:31783490-31795322	Active TSS Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	88 gene(s)	inside rSNPs	diseases
25	nsv884448	chr6:31783527-31794592	Flanking Active TSS Weak transcription Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	58 gene(s)	inside rSNPs	diseases
26	nsv884449	chr6:31783527-31795082	Weak transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	75 gene(s)	inside rSNPs	diseases
27	nsv884450	chr6:31783527-31797769	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
28	nsv884451	chr6:31783527-31800631	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
29	esv3349739	chr6:31785205-31796114	Weak transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	87 gene(s)	inside rSNPs	diseases
30	nsv884452	chr6:31785228-31794592	Enhancers Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
31	nsv884453	chr6:31785228-31795370	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	77 gene(s)	inside rSNPs	diseases
32	esv2421830	chr6:31785228-31797422	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
33	nsv601947	chr6:31785228-31797422	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
34	nsv884454	chr6:31785228-31797422	Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
35	nsv884455	chr6:31785228-31797422	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
36	nsv884456	chr6:31785228-31800631	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	97 gene(s)	inside rSNPs	diseases
37	nsv884457	chr6:31785228-31803130	Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
38	nsv601948	chr6:31785438-31794963	Weak transcription Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	53 gene(s)	inside rSNPs	diseases
39	nsv601949	chr6:31785438-31795082	Enhancers Active TSS Genic enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
40	nsv601950	chr6:31785438-32492308	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
41	nsv601951	chr6:31785438-32496748	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
42	nsv601952	chr6:31785453-31794592	Weak transcription Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
43	nsv884458	chr6:31785453-31795082	Active TSS Flanking Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	64 gene(s)	inside rSNPs	diseases
44	nsv601953	chr6:31785453-31795140	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	66 gene(s)	inside rSNPs	diseases
45	nsv601954	chr6:31785453-31795345	Active TSS Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	77 gene(s)	inside rSNPs	diseases
46	nsv884459	chr6:31785453-31795370	Flanking Active TSS Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	77 gene(s)	inside rSNPs	diseases
47	nsv884460	chr6:31785453-31797422	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	90 gene(s)	inside rSNPs	diseases
48	nsv884461	chr6:31785453-31827045	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
49	nsv601955	chr6:31785453-32484368	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
50	nsv601956	chr6:31785453-32492308	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31783600-31789000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr6:31785000-31786600	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr6:31785000-31786600	Active TSS	Left Ventricle	heart
4	chr6:31785000-31786800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr6:31785000-31787000	Active TSS	Brain Substantia Nigra	brain
6	chr6:31785000-31787000	Active TSS	Esophagus	oesophagus
7	chr6:31785000-31787000	Active TSS	Pancreatic Islets	Pancreatic Islet
8	chr6:31785000-31787000	Active TSS	HMEC	breast
9	chr6:31785000-31787800	Active TSS	Breast Myoepithelial Primary Cells	Breast
10	chr6:31785000-31787800	Active TSS	Brain Germinal Matrix	brain
11	chr6:31785200-31786400	Active TSS	HUES48 Cell Line	embryonic stem cell
12	chr6:31785200-31786400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
13	chr6:31785200-31786400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
14	chr6:31785200-31786400	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
15	chr6:31785200-31786400	Active TSS	Rectal Smooth Muscle	rectum
16	chr6:31785200-31786600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr6:31785200-31786600	Flanking Active TSS	Primary T cells from cord blood	blood
18	chr6:31785200-31786600	Flanking Active TSS	Primary hematopoietic stem cells	blood
19	chr6:31785200-31786600	Flanking Active TSS	Duodenum Mucosa	Duodenum
20	chr6:31785200-31786600	Flanking Active TSS	Fetal Muscle Leg	muscle
21	chr6:31785200-31786600	Flanking Active TSS	HUVEC	blood vessel
22	chr6:31785200-31786800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr6:31785200-31786800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr6:31785200-31786800	Active TSS	Aorta	Aorta
25	chr6:31785200-31786800	Active TSS	Ovary	ovary
26	chr6:31785200-31787000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
27	chr6:31785200-31787000	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr6:31785200-31787000	Flanking Active TSS	Adipose Nuclei	Adipose
29	chr6:31785200-31787000	ZNF genes & repeats	Fetal Stomach	stomach
30	chr6:31785200-31787800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
31	chr6:31785200-31788000	Transcr. at gene 5' and 3'	K562	blood
32	chr6:31785400-31786400	Active TSS	HUES64 Cell Line	embryonic stem cell
33	chr6:31785400-31786400	Flanking Active TSS	Fetal Brain Male	brain
34	chr6:31785400-31786400	Flanking Active TSS	GM12878-XiMat	blood
35	chr6:31785400-31786600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
36	chr6:31785400-31786600	Enhancers	Placenta Amnion	Placenta Amnion
37	chr6:31785400-31786600	Transcr. at gene 5' and 3'	A549	lung
38	chr6:31785400-31786600	Enhancers	HSMMtube	muscle
39	chr6:31785400-31786800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
40	chr6:31785400-31786800	Flanking Active TSS	Osteobl	bone
41	chr6:31785400-31789800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
42	chr6:31785600-31786600	Active TSS	ES-I3 Cell Line	embryonic stem cell
43	chr6:31785600-31786600	Enhancers	H9 Cell Line	embryonic stem cell
44	chr6:31785600-31786600	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
45	chr6:31785600-31786600	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
46	chr6:31785600-31786600	Enhancers	Cortex derived primary cultured neurospheres	brain
47	chr6:31785600-31786600	Flanking Active TSS	Stomach Mucosa	stomach
48	chr6:31785600-31786800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr6:31785600-31786800	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
50	chr6:31785600-31786800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--

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