Variant report

Variant	rs17207608
Chromosome Location	chr6:31802721-31802722
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:507)
CpG islands
(count:61)
Chromatin interactive
region (count:48)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:507 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:31801322-31807327	K562	blood:	n/a	n/a
2	MAFK	chr6:31802497-31803001	HepG2	liver:	n/a	n/a
3	STAT2	chr6:31802113-31803267	K562	blood:	n/a	chr6:31803169-31803180
4	PML	chr6:31801883-31803429	K562	blood:	n/a	n/a
5	TCF12	chr6:31802563-31802842	GM12878	blood:	n/a	n/a
6	SIN3AK20	chr6:31802173-31802910	HepG2	liver:	n/a	n/a
7	POLR2A	chr6:31802029-31803003	SK-N-MC	brain:	n/a	n/a
8	MYC	chr6:31802646-31802983	MCF-7	breast:	n/a	chr6:31802670-31802680
9	POLR2A	chr6:31802107-31803345	U87	brain:	n/a	n/a
10	CTCF	chr6:31802223-31802881	K562	blood:	n/a	n/a
11	USF1	chr6:31802564-31802793	SK-N-SH_RA	brain:	n/a	n/a
12	SMC3	chr6:31802271-31802962	GM12878	blood:	n/a	n/a
13	BATF	chr6:31802658-31803144	GM12878	blood:	n/a	n/a
14	REST	chr6:31802033-31802935	HepG2	liver:	n/a	chr6:31802408-31802418
15	ELK1	chr6:31802185-31803256	K562	blood:	n/a	n/a
16	MAX	chr6:31802013-31803569	K562	blood:	n/a	chr6:31802670-31802680
17	HA-E2F1	chr6:31802027-31803226	MCF-7	breast:	n/a	chr6:31802651-31802661 chr6:31802346-31802357 chr6:31802431-31802441 chr6:31802432-31802442
18	REST	chr6:31802592-31802761	GM12878	blood:	n/a	n/a
19	RUNX3	chr6:31801950-31803267	GM12878	blood:	n/a	n/a
20	YY1	chr6:31802534-31802928	GM12891	blood:	n/a	chr6:31802678-31802688 chr6:31802653-31802662 chr6:31802677-31802689
21	POLR2A	chr6:31802087-31803428	GM12891	blood:	n/a	n/a
22	CREB1	chr6:31802122-31802943	H1-hESC	embryonic stem cell:	n/a	n/a
23	POLR2A	chr6:31802556-31803443	H1-hESC	embryonic stem cell:	n/a	n/a
24	BACH1	chr6:31802154-31802914	H1-hESC	embryonic stem cell:	n/a	n/a
25	IRF1	chr6:31802083-31803318	K562	blood:	n/a	chr6:31803166-31803180 chr6:31802551-31802562 chr6:31802551-31802564 chr6:31803168-31803182 chr6:31803162-31803182
26	NFIC	chr6:31802072-31802975	GM12878	blood:	n/a	n/a
27	NFATC1	chr6:31802176-31803366	GM12878	blood:	n/a	n/a
28	POLR2A	chr6:31802062-31803228	MCF-7	breast:	n/a	n/a
29	E2F6	chr6:31802578-31802984	K562	blood:	n/a	chr6:31802651-31802661
30	TAF1	chr6:31802019-31803420	K562	blood:	n/a	n/a
31	NRF1	chr6:31802073-31803013	SK-N-SH	brain:	n/a	chr6:31802334-31802345
32	TAF1	chr6:31801940-31803212	ECC-1	luminal epithelium:	n/a	n/a
33	POLR2A	chr6:31802060-31803387	GM12892	blood:	n/a	n/a
34	SIN3AK20	chr6:31802052-31803345	MCF-7	breast:	n/a	n/a
35	CEBPD	chr6:31801962-31803418	K562	blood:	n/a	n/a
36	REST	chr6:31801887-31803703	H1-neurons	neurons:	n/a	chr6:31802408-31802418
37	YY1	chr6:31802080-31803182	K562	blood:	n/a	chr6:31802678-31802688 chr6:31802414-31802428 chr6:31802653-31802662 chr6:31802677-31802689 chr6:31802428-31802442
38	FOXM1	chr6:31802064-31802980	GM12878	blood:	n/a	n/a
39	CEBPB	chr6:31802699-31803179	HepG2	liver:	n/a	chr6:31802997-31803008
40	POLR2A	chr6:31802064-31803345	U87	brain:	n/a	n/a
41	CEBPB	chr6:31802005-31803493	GM12878	blood:	n/a	chr6:31802997-31803008
42	TCF3	chr6:31802566-31802849	GM12878	blood:	n/a	n/a
43	FOXA2	chr6:31802542-31802915	A549	lung:	n/a	n/a
44	YY1	chr6:31802470-31802932	H1-hESC	embryonic stem cell:	n/a	chr6:31802678-31802688 chr6:31802653-31802662 chr6:31802677-31802689
45	MAZ	chr6:31802105-31803254	K562	blood:	n/a	chr6:31802670-31802680
46	TAF1	chr6:31802137-31802948	SK-N-SH	brain:	n/a	n/a
47	POLR2A	chr6:31801988-31803528	GM12891	blood:	n/a	n/a
48	EP300	chr6:31802147-31802820	HepG2	liver:	n/a	chr6:31802431-31802440 chr6:31802685-31802699 chr6:31802653-31802662
49	STAT3	chr6:31802176-31802770	MCF10A-Er-Src	breast:	n/a	chr6:31802385-31802396
50	POLR2A	chr6:31802175-31803328	IMR90	lung:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31802711-31802761	NT2-D1	testis:	n/a
2	chr6:31802711-31802761	H1-hESC	embryonic stem cell:	embryo
3	chr6:31802711-31802761	Hela-S3	cervix:	n/a
4	chr6:31802711-31802761	GM19239	blood:	n/a
5	chr6:31802711-31802761	U87	brain:	n/a
6	chr6:31802711-31802761	SK-N-SH	brain:	n/a
7	chr6:31802711-31802761	NHDF-neo	bronchial:	n/a
8	chr6:31802711-31802761	HRE	kidney:	n/a
9	chr6:31802711-31802761	HAEpiC	amniotic membrane:	n/a
10	chr6:31802711-31802761	SK-N-MC	brain:	n/a
11	chr6:31802711-31802761	HCM	heart:	n/a
12	chr6:31802711-31802761	HCPEpiC	choroid plexus:	n/a
13	chr6:31802711-31802761	A549	lung:	n/a
14	chr6:31802711-31802761	HNPCEpiC	eye:	n/a
15	chr6:31802711-31802761	BE2_C	brain:	n/a
16	chr6:31802711-31802761	HEK293	kidney:	embryo
17	chr6:31802711-31802761	PrEC	prostate:	n/a
18	chr6:31802711-31802761	NB4	blood:	n/a
19	chr6:31802711-31802761	IMR90	lung:	fetal
20	chr6:31802711-31802761	MCF-7	breast:	n/a
21	chr6:31802711-31802761	AG04450	lung:	fetal
22	chr6:31802711-31802761	HUVEC	blood vessel:	n/a
23	chr6:31802711-31802761	ProgFib	skin:	n/a
24	chr6:31802711-31802761	AG10803	skin:	n/a
25	chr6:31802711-31802761	AG04449	skin:	fetal
26	chr6:31802711-31802761	HPAEpiC	pulmonary alveolar:	n/a
27	chr6:31802711-31802761	HL-60	blood:	n/a
28	chr6:31802711-31802761	GM12892	blood:	n/a
29	chr6:31802711-31802761	Hepatocyte	liver:	n/a
30	chr6:31802711-31802761	GM06990	blood:	n/a
31	chr6:31802711-31802761	SKMC	muscle:	n/a
32	chr6:31802711-31802761	GM12878	blood:	n/a
33	chr6:31802711-31802761	SK-N-SH_RA	brain:	n/a
34	chr6:31802711-31802761	AoSMC	blood vessel:	n/a
35	chr6:31802711-31802761	NH-A	brain:	n/a
36	chr6:31802711-31802761	PANC-1	pancreas:	n/a
37	chr6:31802711-31802761	NHBE	bronchial:	n/a
38	chr6:31802711-31802761	HRPEpiC	eye:	n/a
39	chr6:31802711-31802761	HEEpiC	esophagus:	n/a
40	chr6:31802711-31802761	BJ	skin:	n/a
41	chr6:31802711-31802761	ovcar-3	ovarian:	n/a
42	chr6:31802711-31802761	ECC-1	luminal epithelium:	n/a
43	chr6:31802711-31802761	CMK	blood:	n/a
44	chr6:31802711-31802761	AG09309	skin:	n/a
45	chr6:31802711-31802761	SAEC	small airway:	n/a
46	chr6:31802711-31802761	HepG2	liver:	n/a
47	chr6:31802711-31802761	LNCaP	prostate:	n/a
48	chr6:31802711-31802761	HMEC	breast:	n/a
49	chr6:31802711-31802761	RPTEC	kidney:	n/a
50	chr6:31802711-31802761	T-47D	breast:	n/a

(count:48 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:31760851..31764032-chr6:31800769..31804370,7	MCF-7	breast:
2	chr3:47324146..47324903-chr6:31802269..31802778,2	HCT-116	colon:
3	chr6:31513047..31514729-chr6:31802148..31804053,2	MCF-7	breast:
4	chr6:31800755..31815108-chr6:31823340..31833266,54	K562	blood:
5	chr12:29301993..29302516-chr6:31802207..31802861,2	NB4	blood:
6	chr6:31800806..31810142-chr6:31827604..31833040,24	MCF-7	breast:
7	chr6:31702549..31706090-chr6:31802474..31805993,4	MCF-7	breast:
8	chr6:31509889..31512472-chr6:31802635..31805585,2	MCF-7	breast:
9	chr12:49658435..49659273-chr6:31802298..31803102,2	Hela-S3	cervix:
10	chr6:31737226..31750413-chr6:31786206..31805473,50	MCF-7	breast:
11	chr6:31801616..31806746-chr6:31865132..31870777,8	MCF-7	breast:
12	chr11:64877278..64879972-chr6:31801371..31804052,2	MCF-7	breast:
13	chr6:31801272..31804221-chr6:31918478..31920926,2	K562	blood:
14	chr6:31656454..31658818-chr6:31801447..31804411,2	MCF-7	breast:
15	chr6:31798354..31804916-chr6:31860790..31871982,18	MCF-7	breast:
16	chr19:811579..813681-chr6:31802411..31804366,2	K562	blood:
17	chr6:31801734..31803566-chr6:31863143..31864724,2	MCF-7	breast:
18	chr6:31802366..31805115-chr6:31938170..31940148,2	K562	blood:
19	chr6:31696408..31700150-chr6:31800226..31805691,5	MCF-7	breast:
20	chr6:31800973..31803192-chr6:31924804..31927036,2	MCF-7	breast:
21	chr6:31630921..31635353-chr6:31802314..31807064,6	MCF-7	breast:
22	chr6:31735011..31745595-chr6:31798203..31806127,22	MCF-7	breast:
23	chr6:31647774..31650438-chr6:31800193..31802973,5	MCF-7	breast:
24	chr6:31799457..31804164-chr6:31924693..31928301,4	K562	blood:
25	chr6:27113220..27115290-chr6:31800925..31803637,2	K562	blood:
26	chr6:31801090..31813654-chr6:31824519..31834411,41	MCF-7	breast:
27	chr6:31800867..31807275-chr6:31862460..31868132,16	K562	blood:
28	chr6:31801119..31803237-chr6:31933557..31935113,2	K562	blood:
29	chr6:31800669..31805219-chr6:31862460..31868046,11	K562	blood:
30	chr6:31669236..31670926-chr6:31800796..31802801,2	MCF-7	breast:
31	chr6:31802171..31804335-chr6:31837175..31839959,2	MCF-7	breast:
32	chr6:31745758..31747408-chr6:31800818..31802986,2	MCF-7	breast:
33	chr6:31588069..31590107-chr6:31801555..31804354,2	MCF-7	breast:
34	chr6:31802718..31804825-chr6:31935287..31937664,2	K562	blood:
35	chr6:31801458..31804077-chr6:31939275..31941249,3	MCF-7	breast:
36	chr11:6255823..6256346-chr6:31802583..31803136,2	Hela-S3	cervix:
37	chr6:31513842..31516738-chr6:31801353..31804200,3	K562	blood:
38	chr6:31801233..31804005-chrX:109560726..109563107,2	K562	blood:
39	chr6:31801352..31804698-chr6:31868339..31871951,3	K562	blood:
40	chr6:31697061..31698060-chr6:31802013..31803127,3	K562	blood:
41	chr6:31801119..31803237-chr6:31932731..31935113,3	K562	blood:
42	chr6:31802188..31802757-chr8:134309407..134310125,2	HCT-116	colon:
43	chr6:31747450..31751295-chr6:31800640..31804723,4	MCF-7	breast:
44	chr6:31800194..31804653-chr6:31841439..31846611,7	MCF-7	breast:
45	chr6:31758502..31767561-chr6:31786193..31804196,52	MCF-7	breast:
46	chr6:31800580..31812447-chr6:31823435..31837480,47	K562	blood:
47	chr6:31697326..31699677-chr6:31802341..31805046,2	MCF-7	breast:
48	chr6:31619085..31621370-chr6:31801083..31803892,2	MCF-7	breast:

No data

Variant related genes	Relation type
SNORD52	TF binding region
SNORD48	TF binding region
C6orf48	TF binding region
SNORD52	CpG island
C6orf48	CpG island
SNORD48	CpG island
ENSG00000213722	Chromatin interaction
ENSG00000254501	Chromatin interaction
ENSG00000201207	Chromatin interaction
ENSG00000213719	Chromatin interaction
ENSG00000184825	Chromatin interaction
ENSG00000204356	Chromatin interaction
ENSG00000204351	Chromatin interaction
ENSG00000204371	Chromatin interaction
ENSG00000204469	Chromatin interaction
ENSG00000258101	Chromatin interaction
ENSG00000204348	Chromatin interaction
ENSG00000213760	Chromatin interaction
ENSG00000204444	Chromatin interaction
ENSG00000263414	Chromatin interaction
ENSG00000149823	Chromatin interaction
ENSG00000254870	Chromatin interaction
ENSG00000201555	Chromatin interaction
ENSG00000051009	Chromatin interaction
ENSG00000204396	Chromatin interaction
ENSG00000204427	Chromatin interaction
ENSG00000204438	Chromatin interaction
ENSG00000243649	Chromatin interaction
ENSG00000221267	Chromatin interaction
ENSG00000204344	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000204498	Chromatin interaction
ENSG00000088727	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000204435	Chromatin interaction
ENSG00000149809	Chromatin interaction
ENSG00000166278	Chromatin interaction
ENSG00000204366	Chromatin interaction
ENSG00000263020	Chromatin interaction
ENSG00000104419	Chromatin interaction
ENSG00000101935	Chromatin interaction
ENSG00000064763	Chromatin interaction
ENSG00000132259	Chromatin interaction
ENSG00000204386	Chromatin interaction
ENSG00000204394	Chromatin interaction
ENSG00000204385	Chromatin interaction
ENSG00000197903	Chromatin interaction
ENSG00000167553	Chromatin interaction
ENSG00000114648	Chromatin interaction
ENSG00000204463	Chromatin interaction
ENSG00000204428	Chromatin interaction

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17201227	1.00[AFR][1000 genomes]
rs17201269	1.00[AFR][1000 genomes]
rs17207657	1.00[AFR][1000 genomes]
rs17207713	0.88[AFR][1000 genomes]
rs35804213	0.88[AFR][1000 genomes]
rs61745377	0.88[AFR][1000 genomes]
rs6908775	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:24 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
2	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
3	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
4	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
5	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
6	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
7	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
8	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
9	nsv1033154	chr6:31550614-32009410	Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
10	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
11	esv3428142	chr6:31615800-31881809	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	257 gene(s)	inside rSNPs	diseases
12	nsv884428	chr6:31728102-31870326	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	162 gene(s)	inside rSNPs	diseases
13	nsv884429	chr6:31730356-31837066	Enhancers Transcr. at gene 5' and 3' Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	155 gene(s)	inside rSNPs	diseases
14	nsv462872	chr6:31778272-31864304	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
15	nsv601945	chr6:31778272-31864304	Flanking Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
16	nsv884457	chr6:31785228-31803130	Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
17	nsv601950	chr6:31785438-32492308	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
18	nsv601951	chr6:31785438-32496748	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
19	nsv884461	chr6:31785453-31827045	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
20	nsv601955	chr6:31785453-32484368	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
21	nsv601956	chr6:31785453-32492308	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
22	nsv462874	chr6:31794592-31864304	Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	118 gene(s)	inside rSNPs	diseases
23	nsv601959	chr6:31794592-31864304	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	118 gene(s)	inside rSNPs	diseases
24	nsv884463	chr6:31797422-31827045	Active TSS Enhancers Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31799600-31803800	Active TSS	Breast Myoepithelial Primary Cells	Breast
2	chr6:31801400-31805000	Active TSS	Pancreatic Islets	Pancreatic Islet
3	chr6:31801600-31803000	Active TSS	Skeletal Muscle Female	skeletal muscle
4	chr6:31801600-31803600	Active TSS	Primary T cells from cord blood	blood
5	chr6:31801600-31803600	Active TSS	Fetal Brain Female	brain
6	chr6:31801600-31803800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr6:31801600-31805000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr6:31801800-31802800	Flanking Active TSS	Primary hematopoietic stem cells	blood
9	chr6:31801800-31803600	Active TSS	ES-I3 Cell Line	embryonic stem cell
10	chr6:31801800-31803800	Active TSS	Primary T helper naive cells from peripheral blood	blood
11	chr6:31801800-31803800	Active TSS	Primary T killer memory cells from peripheral blood	blood
12	chr6:31801800-31803800	Active TSS	Brain Cingulate Gyrus	brain
13	chr6:31801800-31803800	Active TSS	Brain Inferior Temporal Lobe	brain
14	chr6:31801800-31803800	Active TSS	Psoas Muscle	Psoas
15	chr6:31801800-31803800	Active TSS	Rectal Smooth Muscle	rectum
16	chr6:31801800-31803800	Active TSS	Thymus	Thymus
17	chr6:31801800-31804000	Active TSS	Primary T helper cells PMA-I stimulated	--
18	chr6:31801800-31805000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr6:31802000-31802800	Active TSS	iPS-15b Cell Line	embryonic stem cell
20	chr6:31802000-31802800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr6:31802000-31802800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr6:31802000-31803200	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
23	chr6:31802000-31803200	Active TSS	Brain Hippocampus Middle	brain
24	chr6:31802000-31803400	Active TSS	H1 Cell Line	embryonic stem cell
25	chr6:31802000-31803400	Active TSS	Colon Smooth Muscle	Colon
26	chr6:31802000-31803600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr6:31802000-31803600	Active TSS	HUES64 Cell Line	embryonic stem cell
28	chr6:31802000-31803600	Active TSS	Brain Germinal Matrix	brain
29	chr6:31802000-31803600	Active TSS	Colonic Mucosa	Colon
30	chr6:31802000-31803800	Active TSS	H9 Cell Line	embryonic stem cell
31	chr6:31802000-31803800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr6:31802000-31803800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr6:31802000-31803800	Active TSS	HUES48 Cell Line	embryonic stem cell
34	chr6:31802000-31803800	Active TSS	iPS-18 Cell Line	embryonic stem cell
35	chr6:31802000-31803800	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
36	chr6:31802000-31803800	Active TSS	Primary T killer naive cells fromperipheralblood	blood
37	chr6:31802000-31803800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr6:31802000-31803800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr6:31802000-31803800	Active TSS	Liver	Liver
40	chr6:31802000-31803800	Active TSS	Brain Substantia Nigra	brain
41	chr6:31802000-31803800	Active TSS	Fetal Intestine Small	intestine
42	chr6:31802000-31803800	Active TSS	Left Ventricle	heart
43	chr6:31802000-31803800	Active TSS	Pancreas	Pancrea
44	chr6:31802000-31803800	Active TSS	Placenta Amnion	Placenta Amnion
45	chr6:31802000-31803800	Active TSS	Right Ventricle	heart
46	chr6:31802000-31803800	Active TSS	Small Intestine	intestine
47	chr6:31802000-31803800	Active TSS	HSMMtube	muscle
48	chr6:31802000-31803800	Active TSS	NHEK	skin
49	chr6:31802000-31803800	Active TSS	NHLF	lung
50	chr6:31802000-31803800	Active TSS	Osteobl	bone

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