Variant report

Variant rs17207713
Chromosome Location chr6:31833221-31833222
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31830800-31845200 Weak transcription Small Intestine intestine
2 chr6:31831000-31834200 Genic enhancers Stomach Mucosa stomach
3 chr6:31831800-31833400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr6:31831800-31834000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr6:31831800-31845000 Weak transcription Lung lung
6 chr6:31832000-31833800 Enhancers Liver Liver
7 chr6:31832000-31835200 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr6:31832000-31842600 Strong transcription Colonic Mucosa Colon
9 chr6:31832000-31856000 Weak transcription Right Atrium heart
10 chr6:31832200-31833800 Enhancers Fetal Muscle Trunk muscle
11 chr6:31832200-31833800 Weak transcription Rectal Smooth Muscle rectum
12 chr6:31832200-31834000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr6:31832200-31834000 Enhancers Placenta Placenta
14 chr6:31832200-31842800 Strong transcription Fetal Intestine Small intestine
15 chr6:31832400-31833400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr6:31832400-31833400 Strong transcription Fetal Intestine Large intestine
17 chr6:31832400-31833400 Enhancers A549 lung
18 chr6:31832400-31833400 Enhancers Hela-S3 cervix
19 chr6:31832400-31834000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
20 chr6:31832400-31835800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:31832400-31836000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr6:31832400-31836600 Weak transcription Pancreas Pancrea
23 chr6:31832400-31838400 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr6:31832400-31838600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr6:31832400-31840000 Strong transcription Sigmoid Colon Sigmoid Colon
26 chr6:31832400-31840600 Strong transcription Rectal Mucosa Donor 29 rectum
27 chr6:31832400-31840600 Strong transcription Rectal Mucosa Donor 31 rectum
28 chr6:31832400-31847400 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr6:31832400-31847600 Weak transcription Primary T regulatory cells fromperipheralblood blood
30 chr6:31832400-31847600 Weak transcription NH-A brain
31 chr6:31832400-31848200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr6:31832400-31850800 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr6:31832600-31833600 Strong transcription Gastric stomach
34 chr6:31832600-31833800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr6:31832600-31833800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr6:31832600-31834000 Weak transcription Stomach Smooth Muscle stomach
37 chr6:31832600-31834200 Strong transcription Fetal Stomach stomach
38 chr6:31832600-31838000 Weak transcription Spleen Spleen
39 chr6:31832600-31838200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr6:31832800-31833400 Bivalent/Poised TSS HepG2 liver
41 chr6:31832800-31833600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr6:31833000-31833400 Enhancers Dnd41 blood
43 chr6:31833000-31833600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr6:31833000-31834000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr6:31833000-31838600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr6:31833000-31847400 Weak transcription H9 Cell Line embryonic stem cell
47 chr6:31833200-31833400 Enhancers H1 Cell Line embryonic stem cell
48 chr6:31833200-31833800 Genic enhancers K562 blood
49 chr6:31833200-31834200 Strong transcription Duodenum Mucosa Duodenum
50 chr6:31833200-31836600 Weak transcription Fetal Thymus thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links