Variant report

Variant rs17207622
Chromosome Location chr6:31804173-31804174
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31801400-31805000 Active TSS Pancreatic Islets Pancreatic Islet
2 chr6:31801600-31805000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr6:31801800-31805000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr6:31802000-31804400 Active TSS Esophagus oesophagus
5 chr6:31802000-31804400 Active TSS Ovary ovary
6 chr6:31802000-31804600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
7 chr6:31802000-31804600 Active TSS GM12878-XiMat blood
8 chr6:31802000-31807000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr6:31802200-31804200 Active TSS Hela-S3 cervix
10 chr6:31802200-31804200 Active TSS HMEC breast
11 chr6:31802200-31804600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
12 chr6:31802200-31804800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
13 chr6:31802200-31806400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
14 chr6:31802600-31804400 Active TSS Gastric stomach
15 chr6:31802600-31806400 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
16 chr6:31802800-31804200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
17 chr6:31802800-31804600 Flanking Active TSS Adipose Nuclei Adipose
18 chr6:31802800-31805000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
19 chr6:31802800-31806400 Transcr. at gene 5' and 3' iPS-15b Cell Line embryonic stem cell
20 chr6:31802800-31807400 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
21 chr6:31803000-31804200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
22 chr6:31803000-31804600 Flanking Active TSS Primary T cells fromperipheralblood blood
23 chr6:31803000-31805000 Flanking Active TSS Primary B cells from cord blood blood
24 chr6:31803000-31807400 Transcr. at gene 5' and 3' K562 blood
25 chr6:31803000-31817200 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr6:31803200-31804200 Flanking Active TSS Primary B cells from peripheral blood blood
27 chr6:31803200-31804200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr6:31803200-31804200 Flanking Active TSS Brain Angular Gyrus brain
29 chr6:31803200-31804200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
30 chr6:31803200-31804200 Flanking Active TSS Stomach Smooth Muscle stomach
31 chr6:31803200-31805400 Flanking Active TSS Primary hematopoietic stem cells blood
32 chr6:31803400-31804400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
33 chr6:31803400-31804800 Weak transcription Spleen Spleen
34 chr6:31803400-31805400 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
35 chr6:31803400-31806400 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
36 chr6:31803600-31804200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr6:31803600-31804200 Flanking Active TSS Fetal Brain Male brain
38 chr6:31803600-31804600 Flanking Active TSS Primary T cells from cord blood blood
39 chr6:31803600-31804600 Flanking Active TSS Colonic Mucosa Colon
40 chr6:31803600-31804800 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
41 chr6:31803600-31804800 Flanking Active TSS Fetal Brain Female brain
42 chr6:31803600-31804800 Flanking Active TSS Fetal Heart heart
43 chr6:31803600-31805000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
44 chr6:31803600-31805400 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell
45 chr6:31803600-31805400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
46 chr6:31803600-31805400 Flanking Active TSS Brain Germinal Matrix brain
47 chr6:31803600-31806200 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr6:31803600-31807000 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
49 chr6:31803800-31804200 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
50 chr6:31803800-31804200 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell

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