Variant report

Variant	rs4713489
Chromosome Location	chr6:31782943-31782944
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:177)
CpG islands
(count:244)
Chromatin interactive
region (count:38)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:177 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOSL2	chr6:31782902-31784606	HepG2	liver:	n/a	chr6:31783163-31783172 chr6:31783185-31783194 chr6:31782927-31782936
2	SP4	chr6:31782816-31783574	H1-hESC	embryonic stem cell:	n/a	chr6:31783072-31783088 chr6:31783140-31783156
3	POLR2A	chr6:31782886-31785389	GM12878	blood:	n/a	n/a
4	HCFC1	chr6:31781524-31783637	Hela-S3	cervix:	n/a	n/a
5	CREB1	chr6:31782283-31783609	K562	blood:	n/a	n/a
6	CEBPD	chr6:31782355-31783736	K562	blood:	n/a	n/a
7	MXI1	chr6:31782436-31783545	HepG2	liver:	n/a	chr6:31783043-31783058
8	CCNT2	chr6:31782213-31783707	K562	blood:	n/a	chr6:31782769-31782778
9	MAFK	chr6:31782464-31783547	K562	blood:	n/a	n/a
10	IRF1	chr6:31782203-31783561	K562	blood:	n/a	n/a
11	MAX	chr6:31782847-31783025	A549	lung:	n/a	chr6:31782900-31782910
12	POLR2A	chr6:31782248-31783574	K562	blood:	n/a	n/a
13	TAF1	chr6:31782938-31785439	HepG2	liver:	n/a	n/a
14	PBX3	chr6:31782936-31783176	GM12878	blood:	n/a	n/a
15	POLR2A	chr6:31782425-31784264	A549	lung:	n/a	n/a
16	SP1	chr6:31782800-31783681	A549	lung:	n/a	chr6:31783154-31783175 chr6:31783073-31783083 chr6:31783073-31783083 chr6:31783182-31783196
17	ELF1	chr6:31782858-31783590	GM12878	blood:	n/a	n/a
18	NFYB	chr6:31782358-31783529	K562	blood:	n/a	chr6:31783248-31783258 chr6:31783165-31783177 chr6:31783161-31783176 chr6:31783249-31783261 chr6:31783161-31783176 chr6:31783245-31783260 chr6:31783163-31783178 chr6:31783164-31783174 chr6:31783245-31783260 chr6:31783162-31783176 chr6:31782491-31782504
19	POLR2A	chr6:31782195-31783574	K562	blood:	n/a	n/a
20	POLR2A	chr6:31782926-31783723	H1-hESC	embryonic stem cell:	n/a	n/a
21	RCOR1	chr6:31782357-31783517	Hela-S3	cervix:	n/a	n/a
22	POLR2A	chr6:31782485-31783547	K562	blood:	n/a	n/a
23	POLR2A	chr6:31782770-31783572	H1-neurons	neurons:	n/a	n/a
24	TAF1	chr6:31782365-31783832	H1-hESC	embryonic stem cell:	n/a	n/a
25	POLR2A	chr6:31781969-31783588	K562	blood:	n/a	n/a
26	YY1	chr6:31782823-31783136	GM12878	blood:	n/a	n/a
27	HEY1	chr6:31782870-31785566	K562	blood:	n/a	n/a
28	MAX	chr6:31782320-31783603	A549	lung:	n/a	chr6:31783047-31783056 chr6:31782900-31782910 chr6:31783079-31783089
29	MAX	chr6:31782299-31783598	MCF-7	breast:	n/a	chr6:31783047-31783056 chr6:31782900-31782910 chr6:31783079-31783089
30	POLR2A	chr6:31782384-31783571	Hela-S3	cervix:	n/a	n/a
31	SIN3AK20	chr6:31782271-31783630	PANC-1	pancreas:	n/a	n/a
32	POLR2A	chr6:31782906-31785452	Hela-S3	cervix:	n/a	n/a
33	POLR2A	chr6:31782226-31783577	K562	blood:	n/a	n/a
34	MAX	chr6:31782052-31783542	K562	blood:	n/a	chr6:31783047-31783056 chr6:31782900-31782910 chr6:31783079-31783089
35	MXI1	chr6:31782460-31783620	Hela-S3	cervix:	n/a	chr6:31783043-31783058
36	PML	chr6:31782365-31783622	K562	blood:	n/a	n/a
37	CHD2	chr6:31782284-31783528	Hela-S3	cervix:	n/a	n/a
38	POLR2A	chr6:31782925-31784216	HepG2	liver:	n/a	n/a
39	GATA3	chr6:31782400-31783030	T-47D	breast:	n/a	n/a
40	MYC	chr6:31782372-31783563	K562	blood:	n/a	chr6:31783047-31783056 chr6:31782900-31782910 chr6:31783079-31783089
41	EP300	chr6:31781201-31783632	SK-N-SH	brain:	n/a	chr6:31782928-31782944 chr6:31782372-31782385 chr6:31782453-31782466
42	MYBL2	chr6:31782910-31783603	HepG2	liver:	n/a	n/a
43	YY1	chr6:31782301-31783165	K562	blood:	n/a	chr6:31782506-31782518 chr6:31782507-31782529
44	CBX3	chr6:31781275-31785537	K562	blood:	n/a	n/a
45	POLR2A	chr6:31782879-31783622	HepG2	liver:	n/a	n/a
46	GABPA	chr6:31782634-31783592	K562	blood:	n/a	chr6:31782959-31782973 chr6:31782956-31782970
47	IRF1	chr6:31782200-31783547	K562	blood:	n/a	n/a
48	POLR2A	chr6:31781587-31785535	Hela-S3	cervix:	n/a	n/a
49	POLR2A	chr6:31782869-31783531	HepG2	liver:	n/a	n/a
50	HMGN3	chr6:31782438-31783666	K562	blood:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31782922-31782972	HL-60	blood:	n/a
2	chr6:31782929-31782979	HRE	kidney:	n/a
3	chr6:31782929-31782979	IMR90	lung:	fetal
4	chr6:31782929-31782979	SK-N-MC	brain:	n/a
5	chr6:31782922-31782972	NT2-D1	testis:	n/a
6	chr6:31782922-31782972	SK-N-SH	brain:	n/a
7	chr6:31782898-31782948	NB4	blood:	n/a
8	chr6:31782898-31782948	BE2_C	brain:	n/a
9	chr6:31782922-31782972	PANC-1	pancreas:	n/a
10	chr6:31782898-31782948	HCF	heart:	n/a
11	chr6:31782929-31782979	HCM	heart:	n/a
12	chr6:31782929-31782979	HCT-116	colon:	n/a
13	chr6:31782929-31782979	SAEC	small airway:	n/a
14	chr6:31782922-31782972	PFSK-1	brain:	n/a
15	chr6:31782922-31782972	GM12891	blood:	n/a
16	chr6:31782918-31782968	BE2_C	brain:	n/a
17	chr6:31782918-31782968	Jurkat	blood:	n/a
18	chr6:31782898-31782948	U87	brain:	n/a
19	chr6:31782929-31782979	NB4	blood:	n/a
20	chr6:31782918-31782968	NHBE	bronchial:	n/a
21	chr6:31782922-31782972	LNCaP	prostate:	n/a
22	chr6:31782922-31782972	MCF10A-Er-Src	breast:	n/a
23	chr6:31782898-31782948	HRCEpiC	kidney:	n/a
24	chr6:31782929-31782979	K562	blood:	n/a
25	chr6:31782929-31782979	AG09309	skin:	n/a
26	chr6:31782918-31782968	BJ	skin:	n/a
27	chr6:31782918-31782968	AG04450	lung:	fetal
28	chr6:31782929-31782979	HRCEpiC	kidney:	n/a
29	chr6:31782898-31782948	NHBE	bronchial:	n/a
30	chr6:31782918-31782968	AG04449	skin:	fetal
31	chr6:31782898-31782948	IMR90	lung:	fetal
32	chr6:31782929-31782979	RPTEC	kidney:	n/a
33	chr6:31782922-31782972	SK-N-MC	brain:	n/a
34	chr6:31782898-31782948	RPTEC	kidney:	n/a
35	chr6:31782929-31782979	SK-N-SH_RA	brain:	n/a
36	chr6:31782898-31782948	NHDF-neo	bronchial:	n/a
37	chr6:31782898-31782948	GM12878	blood:	n/a
38	chr6:31782918-31782968	Hepatocyte	liver:	n/a
39	chr6:31782929-31782979	NT2-D1	testis:	n/a
40	chr6:31782918-31782968	HNPCEpiC	eye:	n/a
41	chr6:31782898-31782948	AG10803	skin:	n/a
42	chr6:31782918-31782968	HEK293	kidney:	embryo
43	chr6:31782918-31782968	HAEpiC	amniotic membrane:	n/a
44	chr6:31782922-31782972	Caco-2	colon:	n/a
45	chr6:31782922-31782972	H1-hESC	embryonic stem cell:	embryo
46	chr6:31782929-31782979	HepG2	liver:	n/a
47	chr6:31782898-31782948	AoSMC	blood vessel:	n/a
48	chr6:31782929-31782979	HAEpiC	amniotic membrane:	n/a
49	chr6:31782929-31782979	Caco-2	colon:	n/a
50	chr6:31782898-31782948	LNCaP	prostate:	n/a

(count:38 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:31781796..31783894-chr6:31925428..31927086,2	K562	blood:
2	chr6:31781417..31783934-chr6:32937499..32939420,2	K562	blood:
3	chr6:31782856..31784391-chr6:31887336..31890005,2	MCF-7	breast:
4	chr2:96810724..96811482-chr6:31782507..31783438,2	Hela-S3	cervix:
5	chr6:31780821..31784746-chr6:31829825..31831701,4	MCF-7	breast:
6	chr6:31619043..31621335-chr6:31782938..31784758,2	MCF-7	breast:
7	chr6:31507867..31510784-chr6:31781026..31784406,3	MCF-7	breast:
8	chr6:31763546..31764167-chr6:31782631..31783559,2	K562	blood:
9	chr6:31782095..31783822-chr6:31794892..31795963,5	MCF-7	breast:
10	chr6:31782831..31783806-chr7:73244880..73245535,2	Hela-S3	cervix:
11	chr6:31782025..31784864-chr6:32163977..32165547,2	K562	blood:
12	chr6:31781780..31785433-chr6:31828310..31832689,5	K562	blood:
13	chr6:31513245..31516542-chr6:31782394..31785632,3	MCF-7	breast:
14	chr6:31780396..31783150-chr6:32157710..32160077,2	K562	blood:
15	chr6:31781780..31785433-chr6:31829263..31832689,6	K562	blood:
16	chr6:31743107..31747994-chr6:31781956..31785553,7	MCF-7	breast:
17	chr6:31782559..31783446-chr6:106772863..106773513,2	Hela-S3	cervix:
18	chr6:31587709..31590301-chr6:31782411..31784104,4	MCF-7	breast:
19	chr6:31782709..31783766-chr6:31794789..31796004,3	NB4	blood:
20	chr6:31782799..31783519-chr6:31795186..31795913,7	MCF-7	breast:
21	chr6:31780956..31783456-chr6:31865283..31866829,2	K562	blood:
22	chr6:31782707..31783357-chrX:77041284..77041967,2	Hela-S3	cervix:
23	chr6:31780296..31786175-chr6:31828333..31833086,7	MCF-7	breast:
24	chr6:31782320..31783797-chr6:31794894..31795956,19	Hela-S3	cervix:
25	chr1:155903873..155904420-chr6:31782548..31783355,2	Hela-S3	cervix:
26	chr17:44344107..44344671-chr6:31782845..31783404,2	Hela-S3	cervix:
27	chr6:31630940..31635916-chr6:31782579..31784659,6	MCF-7	breast:
28	chr6:31759482..31765185-chr6:31781824..31784897,13	MCF-7	breast:
29	chr6:31782860..31784585-chr6:31867498..31869267,2	K562	blood:
30	chr15:75249240..75250135-chr6:31782923..31783461,2	Hela-S3	cervix:
31	chr6:31756951..31764627-chr6:31780500..31799197,32	MCF-7	breast:
32	chr17:7155331..7155956-chr6:31782606..31783574,2	Hela-S3	cervix:
33	chr19:18391974..18392588-chr6:31782500..31783099,2	Hela-S3	cervix:
34	chr6:31508732..31511014-chr6:31781931..31784408,2	K562	blood:
35	chr6:31781258..31784668-chr6:32935964..32938963,3	MCF-7	breast:
36	chr6:31781426..31784987-chr6:31937458..31940746,3	K562	blood:
37	chr6:31780574..31784383-chr6:31865157..31867218,4	K562	blood:
38	chr6:31782813..31783380-chrX:16737147..16737905,2	Hela-S3	cervix:

No data

Variant related genes	Relation type
HSPA1A	TF binding region
HSPA1L	TF binding region
HSPA1L	CpG island
HSPA1A	CpG island
ENSG00000204463	Chromatin interaction
ENSG00000204304	Chromatin interaction
ENSG00000204438	Chromatin interaction
ENSG00000204396	Chromatin interaction
ENSG00000265236	Chromatin interaction
ENSG00000201555	Chromatin interaction
ENSG00000204351	Chromatin interaction
ENSG00000169895	Chromatin interaction
ENSG00000204435	Chromatin interaction
ENSG00000263020	Chromatin interaction
ENSG00000204498	Chromatin interaction
ENSG00000204348	Chromatin interaction
ENSG00000204388	Chromatin interaction
ENSG00000201207	Chromatin interaction
ENSG00000132680	Chromatin interaction
ENSG00000204386	Chromatin interaction
ENSG00000204371	Chromatin interaction
ENSG00000204469	Chromatin interaction
ENSG00000204385	Chromatin interaction
ENSG00000085224	Chromatin interaction
ENSG00000204301	Chromatin interaction
ENSG00000204257	Chromatin interaction
ENSG00000166278	Chromatin interaction
ENSG00000204444	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000057663	Chromatin interaction
ENSG00000189143	Chromatin interaction
ENSG00000213760	Chromatin interaction
ENSG00000223837	Chromatin interaction
ENSG00000204394	Chromatin interaction
ENSG00000204344	Chromatin interaction
ENSG00000170291	Chromatin interaction
ENSG00000130522	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000178718	Chromatin interaction
ENSG00000175826	Chromatin interaction
ENSG00000204256	Chromatin interaction
ENSG00000261575	Chromatin interaction
ENSG00000158050	Chromatin interaction
ENSG00000204356	Chromatin interaction
ENSG00000198794	Chromatin interaction
ENSG00000254870	Chromatin interaction

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11965654	0.86[AFR][1000 genomes]
rs11966331	0.81[AFR][1000 genomes]
rs13193280	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17207552	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17207622	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2227955	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs34416404	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4947332	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs59324322	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:22 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601609	chr6:31280101-31799786	Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
2	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
3	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
4	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
5	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
6	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
7	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
8	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
9	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
10	nsv1033154	chr6:31550614-32009410	Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
11	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
12	esv3428142	chr6:31615800-31881809	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	257 gene(s)	inside rSNPs	diseases
13	nsv884426	chr6:31728102-31800868	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	139 gene(s)	inside rSNPs	diseases
14	nsv884427	chr6:31728102-31802465	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	152 gene(s)	inside rSNPs	diseases
15	nsv884428	chr6:31728102-31870326	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	162 gene(s)	inside rSNPs	diseases
16	nsv884429	chr6:31730356-31837066	Enhancers Transcr. at gene 5' and 3' Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	155 gene(s)	inside rSNPs	diseases
17	nsv884430	chr6:31731881-31800631	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	139 gene(s)	inside rSNPs	diseases
18	nsv462872	chr6:31778272-31864304	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
19	nsv601945	chr6:31778272-31864304	Flanking Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
20	nsv981359	chr6:31779004-31797103	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	111 gene(s)	inside rSNPs	diseases
21	nsv869989	chr6:31779203-31797657	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	114 gene(s)	inside rSNPs	diseases
22	nsv601946	chr6:31782617-31795082	Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	85 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31774800-31783000	Weak transcription	Gastric	stomach
2	chr6:31781400-31783400	Flanking Active TSS	Primary B cells from cord blood	blood
3	chr6:31781600-31783000	Active TSS	Colonic Mucosa	Colon
4	chr6:31781600-31783600	Active TSS	ES-I3 Cell Line	embryonic stem cell
5	chr6:31781600-31783600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
6	chr6:31781600-31783800	Active TSS	H9 Cell Line	embryonic stem cell
7	chr6:31781600-31783800	Active TSS	HUES64 Cell Line	embryonic stem cell
8	chr6:31781600-31783800	Active TSS	Fetal Brain Female	brain
9	chr6:31781600-31783800	Active TSS	Left Ventricle	heart
10	chr6:31781600-31783800	Active TSS	Right Ventricle	heart
11	chr6:31781800-31783600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr6:31781800-31783600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr6:31781800-31783600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
14	chr6:31781800-31783600	Active TSS	Brain Angular Gyrus	brain
15	chr6:31781800-31783600	Active TSS	Brain Substantia Nigra	brain
16	chr6:31781800-31783600	Active TSS	Duodenum Smooth Muscle	Duodenum
17	chr6:31781800-31783600	Active TSS	Ovary	ovary
18	chr6:31781800-31783600	Active TSS	NHLF	lung
19	chr6:31781800-31783800	Active TSS	H1 Cell Line	embryonic stem cell
20	chr6:31781800-31783800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr6:31781800-31783800	Active TSS	iPS-15b Cell Line	embryonic stem cell
22	chr6:31781800-31783800	Active TSS	iPS-18 Cell Line	embryonic stem cell
23	chr6:31781800-31783800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr6:31781800-31783800	Active TSS	Brain Anterior Caudate	brain
25	chr6:31781800-31783800	Active TSS	Brain Germinal Matrix	brain
26	chr6:31781800-31783800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
27	chr6:31781800-31783800	Active TSS	Fetal Kidney	kidney
28	chr6:31781800-31783800	Active TSS	Rectal Mucosa Donor 29	rectum
29	chr6:31781800-31783800	Active TSS	Rectal Smooth Muscle	rectum
30	chr6:31781800-31783800	Active TSS	K562	blood
31	chr6:31782000-31783200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr6:31782000-31783400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr6:31782000-31783400	Active TSS	Primary hematopoietic stem cells	blood
34	chr6:31782000-31783600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
35	chr6:31782000-31783600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr6:31782000-31783600	Active TSS	Breast Myoepithelial Primary Cells	Breast
37	chr6:31782000-31783600	Active TSS	Primary T cells from cord blood	blood
38	chr6:31782000-31783600	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
39	chr6:31782000-31783600	Active TSS	Primary T killer naive cells fromperipheralblood	blood
40	chr6:31782000-31783600	Active TSS	Primary T killer memory cells from peripheral blood	blood
41	chr6:31782000-31783600	Active TSS	Liver	Liver
42	chr6:31782000-31783600	Active TSS	Brain Cingulate Gyrus	brain
43	chr6:31782000-31783600	Active TSS	Brain Hippocampus Middle	brain
44	chr6:31782000-31783600	Active TSS	Brain Inferior Temporal Lobe	brain
45	chr6:31782000-31783600	Active TSS	Colon Smooth Muscle	Colon
46	chr6:31782000-31783600	Active TSS	Sigmoid Colon	Sigmoid Colon
47	chr6:31782000-31783600	Active TSS	A549	lung
48	chr6:31782000-31783600	Active TSS	GM12878-XiMat	blood
49	chr6:31782000-31783800	Active TSS	HUES48 Cell Line	embryonic stem cell
50	chr6:31782000-31783800	Active TSS	HUES6 Cell Line	embryonic stem cell

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