The 2.0 version of rSNPBase

Variant report

Variant rs172148
Chromosome Location chr5:70872521-70872522
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:70846000-70872800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr5:70850000-70882200 Weak transcription Psoas Muscle Psoas
3 chr5:70856800-70882400 Weak transcription NHEK skin
4 chr5:70857000-70882200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr5:70857800-70882200 Weak transcription Brain Angular Gyrus brain
6 chr5:70858600-70873800 Weak transcription H9 Cell Line embryonic stem cell
7 chr5:70858800-70882200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr5:70858800-70882200 Weak transcription Colon Smooth Muscle Colon
9 chr5:70859200-70882400 Weak transcription Right Ventricle heart
10 chr5:70859400-70882200 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr5:70861400-70882200 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr5:70861400-70882400 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr5:70861600-70882200 Weak transcription Muscle Satellite Cultured Cells --
14 chr5:70861600-70882200 Weak transcription GM12878-XiMat blood
15 chr5:70861600-70882400 Weak transcription Primary B cells from cord blood blood
16 chr5:70863200-70882400 Weak transcription HUVEC blood vessel
17 chr5:70864200-70882400 Weak transcription Placenta Amnion Placenta Amnion
18 chr5:70864200-70882400 Weak transcription HSMM muscle
19 chr5:70864400-70873800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr5:70864400-70881800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr5:70864400-70882000 Weak transcription Liver Liver
22 chr5:70864400-70882200 Weak transcription Left Ventricle heart
23 chr5:70864400-70882200 Weak transcription Pancreas Pancrea
24 chr5:70864400-70882400 Weak transcription HSMMtube muscle
25 chr5:70864600-70872600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr5:70864600-70873000 Weak transcription Adipose Nuclei Adipose
27 chr5:70864600-70873800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr5:70864600-70873800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr5:70864600-70873800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr5:70864600-70873800 Weak transcription Fetal Muscle Leg muscle
31 chr5:70864600-70873800 Weak transcription Lung lung
32 chr5:70864600-70877600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr5:70864600-70881800 Weak transcription Primary T cells fromperipheralblood blood
34 chr5:70864600-70882200 Weak transcription Brain Anterior Caudate brain
35 chr5:70864600-70882200 Weak transcription Brain Cingulate Gyrus brain
36 chr5:70864600-70882200 Weak transcription Brain Substantia Nigra brain
37 chr5:70864600-70882200 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr5:70864600-70882200 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr5:70864600-70882400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr5:70864600-70882400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr5:70864600-70882400 Weak transcription Esophagus oesophagus
42 chr5:70864600-70882400 Weak transcription Fetal Intestine Large intestine
43 chr5:70864600-70882400 Weak transcription Thymus Thymus
44 chr5:70864600-70882600 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr5:70864800-70873600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr5:70864800-70878200 Weak transcription Brain Germinal Matrix brain
47 chr5:70864800-70882000 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr5:70864800-70882200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr5:70864800-70882200 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr5:70864800-70882400 Weak transcription A549 lung

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Last update: Aug 31, 2015