Variant report

Variant	rs464594
Chromosome Location	chr5:70884687-70884688
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:12)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:12 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr5:70884333-70884966	K562	blood:	n/a	n/a
2	POLR2A	chr5:70884285-70884829	GM12892	blood:	n/a	n/a
3	POLR2A	chr5:70884308-70885419	HepG2	liver:	n/a	n/a
4	POLR2A	chr5:70884227-70884693	GM12891	blood:	n/a	n/a
5	WRNIP1	chr5:70884142-70884780	GM12878	blood:	n/a	n/a
6	POLR2A	chr5:70884346-70884798	GM12892	blood:	n/a	n/a
7	MXI1	chr5:70884576-70885666	SK-N-SH	brain:	n/a	n/a
8	POLR2A	chr5:70884185-70885291	MCF10A-Er-Src	breast:	n/a	n/a
9	POLR2A	chr5:70884350-70884714	GM12878	blood:	n/a	n/a
10	GATA3	chr5:70884640-70885006	SH-SY5Y	brain:	n/a	n/a
11	TBP	chr5:70884567-70884696	K562	blood:	n/a	n/a
12	POLR2A	chr5:70884278-70885418	GM12878	blood:	n/a	n/a

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:70749978..70751854-chr5:70881938..70884932,2	K562	blood:
2	chr5:70881577..70886916-chr5:70891929..70900227,16	MCF-7	breast:
3	chr5:70870301..70875589-chr5:70883224..70887581,4	MCF-7	breast:
4	chr5:70882648..70886012-chr5:70920531..70924466,3	K562	blood:
5	chr5:70880665..70885311-chr5:70885640..70890340,6	K562	blood:
6	chr5:70880133..70886735-chr5:70895650..70901637,10	MCF-7	breast:
7	chr5:70881870..70884694-chr5:70885301..70891902,7	MCF-7	breast:
8	chr5:70883878..70887580-chr5:70891405..70894928,5	K562	blood:
9	chr5:70883251..70886427-chr5:70928765..70931034,4	MCF-7	breast:
10	chr5:70882556..70884981-chr5:176924076..176925754,2	MCF-7	breast:

No data

Variant related genes	Relation type
MCCC2	TF binding region
ENSG00000145734	Chromatin interaction
ENSG00000196923	Chromatin interaction
ENSG00000131844	Chromatin interaction

Extended variants
information (count: 163 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:160)

rs_ID	r²[population]
rs10942466	0.81[AMR][1000 genomes]
rs10942683	0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs11740849	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11742923	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11744961	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12109984	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12110291	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs12514575	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12658383	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13153636	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13158264	0.83[AMR][1000 genomes]
rs13165848	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13168805	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13175174	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13185319	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13185743	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs1559260	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs156753	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs156754	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs156755	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs157044	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs157045	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs157046	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs166757	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1693895	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1698063	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs172148	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17334377	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs175872	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs182190	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs1833856	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs185733	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs188059	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs190692	0.87[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1961760	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2059192	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2059193	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs2059194	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2059195	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2315519	0.83[AMR][1000 genomes]
rs2315534	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2432059	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2432060	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2454086	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2646639	0.85[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2652615	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs276590	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs276591	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs276592	0.81[AMR][1000 genomes]
rs276593	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs276594	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs276595	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs276597	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs276598	0.87[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs276599	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs276600	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs276601	0.86[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs277939	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs277940	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs277942	0.86[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs277944	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs277945	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs277948	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs277954	0.87[AMR][1000 genomes]
rs277957	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs277958	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs277960	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs277961	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs277962	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs277963	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs277964	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs277965	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs277966	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs277967	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs277969	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs277978	0.81[AMR][1000 genomes]
rs277986	0.86[AMR][1000 genomes]
rs279290	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs279291	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs279322	0.84[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs279337	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35327154	0.87[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs35420270	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35696325	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs36036841	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs375458	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3761965	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs3761967	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs378585	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs384732	0.85[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs3890749	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs392791	0.85[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs404692	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs410776	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs418738	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs4337836	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs439698	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs441691	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs445771	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs451229	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs457908	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs458009	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs458150	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs458370	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs458534	0.89[ASN][1000 genomes]
rs459298	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs459787	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs460778	0.87[AMR][1000 genomes]
rs461215	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs462282	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs463871	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs464155	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs464182	0.88[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs464962	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs465073	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs466930	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs467160	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs467381	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs467413	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs467563	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs467620	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs467851	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs467901	0.82[AMR][1000 genomes]
rs468028	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs468033	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs468128	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs468158	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs468446	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs468467	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs468564	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs468633	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs468658	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs468776	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs468832	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs469039	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs469142	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs469369	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs469379	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs469548	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs469617	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4703986	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4704049	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4704096	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs541035	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs560394	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62361813	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62374360	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs66528760	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6871754	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6885523	0.88[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs715748	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7442961	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7443763	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs7444320	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7447146	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7448990	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7702940	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7726336	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7737101	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9791120	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1034703	chr5:70391173-70995695	Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
2	esv2754424	chr5:70749744-70885544	Weak transcription Flanking Active TSS Active TSS Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
3	nsv830340	chr5:70797113-70967110	Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs464594	BDP1	Cis_1M	lymphoblastoid	RTeQTL
rs464594	RP11-195E2.1	cis	Nerve Tibial	GTEx

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:70882200-70884800	Active TSS	iPS-20b Cell Line	embryonic stem cell
2	chr5:70882200-70884800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr5:70882200-70885600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr5:70883400-70884800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
5	chr5:70883400-70885400	Flanking Active TSS	Dnd41	blood
6	chr5:70883600-70884800	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
7	chr5:70883600-70885000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr5:70883600-70885000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr5:70883800-70884800	Enhancers	Primary hematopoietic stem cells	blood
10	chr5:70883800-70884800	Enhancers	Fetal Brain Male	brain
11	chr5:70883800-70884800	Enhancers	Stomach Mucosa	stomach
12	chr5:70883800-70885000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
13	chr5:70883800-70885200	Enhancers	Fetal Heart	heart
14	chr5:70883800-70885600	Enhancers	Spleen	Spleen
15	chr5:70883800-70886000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
16	chr5:70883800-70889000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
17	chr5:70883800-70889800	Weak transcription	Lung	lung
18	chr5:70883800-70892000	Weak transcription	Monocytes-CD14+_RO01746	blood
19	chr5:70883800-70892000	Weak transcription	NH-A	brain
20	chr5:70883800-70895400	Weak transcription	HSMMtube	muscle
21	chr5:70883800-70896400	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr5:70883800-70906600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr5:70883800-70916400	Weak transcription	Primary neutrophils fromperipheralblood	blood
24	chr5:70884000-70884800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr5:70884000-70884800	Enhancers	Cortex derived primary cultured neurospheres	brain
26	chr5:70884000-70884800	Enhancers	Gastric	stomach
27	chr5:70884000-70885000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr5:70884000-70885000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
29	chr5:70884000-70885000	Enhancers	Colon Smooth Muscle	Colon
30	chr5:70884000-70885000	Weak transcription	Left Ventricle	heart
31	chr5:70884000-70885200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
32	chr5:70884000-70885200	Enhancers	Brain Inferior Temporal Lobe	brain
33	chr5:70884000-70885200	Enhancers	Brain Substantia Nigra	brain
34	chr5:70884000-70885400	Enhancers	Brain Hippocampus Middle	brain
35	chr5:70884000-70885600	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr5:70884000-70885600	Weak transcription	Right Ventricle	heart
37	chr5:70884000-70885800	Enhancers	Primary B cells from cord blood	blood
38	chr5:70884000-70886200	Enhancers	Primary B cells from peripheral blood	blood
39	chr5:70884000-70886200	Enhancers	Pancreas	Pancrea
40	chr5:70884000-70886400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr5:70884000-70886600	Enhancers	Primary T cells fromperipheralblood	blood
42	chr5:70884000-70886600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
43	chr5:70884000-70887000	Enhancers	Adipose Nuclei	Adipose
44	chr5:70884000-70887800	Weak transcription	Fetal Stomach	stomach
45	chr5:70884000-70889800	Weak transcription	Fetal Muscle Trunk	muscle
46	chr5:70884000-70889800	Weak transcription	Fetal Muscle Leg	muscle
47	chr5:70884000-70891400	Weak transcription	Fetal Thymus	thymus
48	chr5:70884000-70891600	Weak transcription	Fetal Brain Female	brain
49	chr5:70884000-70892000	Weak transcription	H9 Cell Line	embryonic stem cell
50	chr5:70884000-70892000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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