Variant report

Variant	rs17223448
Chromosome Location	chr12:1301401-1301402
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 98 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:67)

rs_ID	r²[population]
rs10161285	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs1017019	0.83[EUR][1000 genomes]
rs10848456	0.89[CHB][hapmap]
rs11061677	0.88[CHB][hapmap]
rs11061679	0.88[CHB][hapmap]
rs11061682	0.89[CHB][hapmap]
rs11061691	0.89[CHB][hapmap]
rs11061702	0.89[CHB][hapmap];0.86[JPT][hapmap]
rs11061703	0.89[CHB][hapmap];1.00[JPT][hapmap]
rs11835033	0.87[EUR][1000 genomes]
rs11837033	0.86[AFR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11837972	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12426509	0.92[CEU][hapmap];0.94[CHB][hapmap];0.93[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.84[TSI][hapmap];0.87[EUR][1000 genomes]
rs1544425	0.88[ASW][hapmap];0.92[CEU][hapmap];0.94[CHB][hapmap];0.86[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.81[MKK][hapmap];0.84[TSI][hapmap];0.82[YRI][hapmap];0.85[EUR][1000 genomes]
rs16928347	0.84[CHB][hapmap]
rs17800876	0.88[ASW][hapmap];0.92[CEU][hapmap];0.94[CHB][hapmap];0.93[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.91[MKK][hapmap];0.84[TSI][hapmap];0.91[YRI][hapmap];0.87[EUR][1000 genomes]
rs2189788	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.91[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2286031	0.88[CHB][hapmap]
rs2286037	0.94[CHB][hapmap];0.93[CHD][hapmap]
rs2369701	0.88[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];0.82[MEX][hapmap];0.82[EUR][1000 genomes]
rs2906103	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2906105	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2906106	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2906109	0.88[CEU][hapmap];0.88[CHB][hapmap];0.86[CHD][hapmap];0.82[MEX][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2906111	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2906112	0.87[CEU][hapmap];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2968874	0.84[CEU][hapmap];0.88[CHB][hapmap];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2968875	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2968876	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2968880	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2968881	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2968882	0.88[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];0.82[MEX][hapmap];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4511332	0.91[CEU][hapmap];0.82[CHB][hapmap]
rs56385373	0.82[EUR][1000 genomes]
rs56968978	0.83[EUR][1000 genomes]
rs57389981	0.83[AFR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs58159804	0.87[EUR][1000 genomes]
rs60257878	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs61623983	0.88[AFR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs61911966	0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs61911969	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs61911972	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs61914332	0.83[AFR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6489270	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.91[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.83[AFR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6489277	0.89[CHB][hapmap];0.83[CHD][hapmap]
rs7133150	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7137058	0.94[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.91[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7137563	0.96[CEU][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7299878	0.96[CEU][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7300575	0.84[CHB][hapmap]
rs7303756	0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7303850	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.86[MKK][hapmap];0.95[TSI][hapmap];0.91[YRI][hapmap];0.80[AFR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7305579	0.85[AFR][1000 genomes]
rs7306130	0.84[CHB][hapmap];0.80[CHD][hapmap]
rs7311531	1.00[CEU][hapmap];0.91[YRI][hapmap];0.83[AFR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7315544	0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7954213	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7958662	0.88[CHB][hapmap]
rs7971670	0.88[ASW][hapmap];0.96[CEU][hapmap];0.94[CHB][hapmap];0.93[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.89[MKK][hapmap];0.86[TSI][hapmap];0.95[YRI][hapmap];0.87[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7975854	0.84[CHB][hapmap]
rs7976337	0.87[EUR][1000 genomes]
rs7977526	0.84[AFR][1000 genomes]
rs7980065	0.94[CHB][hapmap];0.83[CHD][hapmap];0.85[JPT][hapmap]
rs7980582	0.86[EUR][1000 genomes]
rs979335	0.84[AFR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9943709	0.87[AFR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9943818	0.84[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:31 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898576	chr12:813411-1553450	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
2	nsv948760	chr12:863833-1542875	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
3	nsv1052589	chr12:910460-1421493	ZNF genes & repeats Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
4	nsv1045278	chr12:920251-1697030	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
5	nsv529398	chr12:941915-1741311	Weak transcription Strong transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
6	nsv468960	chr12:975276-1455106	Enhancers Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
7	nsv556941	chr12:975276-1455106	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
8	nsv1044329	chr12:985144-1403020	Genic enhancers Weak transcription Enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
9	nsv541340	chr12:985144-1403020	Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
10	nsv470256	chr12:998365-1438761	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
11	nsv492321	chr12:1011692-1388512	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
12	nsv898579	chr12:1013176-1510505	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
13	nsv898580	chr12:1024688-1569097	Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
14	nsv1036488	chr12:1041097-1445923	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
15	nsv1037825	chr12:1045734-1432940	Bivalent/Poised TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
16	nsv541342	chr12:1045734-1432940	Active TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
17	nsv868854	chr12:1045935-1354083	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
18	esv2762958	chr12:1049279-1554962	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
19	nsv1052559	chr12:1077964-1588543	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
20	nsv898581	chr12:1084783-1527359	Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
21	nsv1041799	chr12:1091294-1304839	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
22	nsv541343	chr12:1091294-1304839	Flanking Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
23	nsv1046134	chr12:1153489-1675223	Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
24	nsv541344	chr12:1153489-1675223	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
25	nsv1042863	chr12:1163817-1902302	Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
26	nsv541345	chr12:1163817-1902302	Strong transcription Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
27	nsv1039826	chr12:1259831-1483326	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
28	nsv930996	chr12:1270113-1473328	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
29	nsv524525	chr12:1272363-1366511	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
30	nsv1050361	chr12:1274052-1541558	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
31	nsv898582	chr12:1286841-1416592	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs17223448	DDX28	trans	parietal	SCAN

Chromatin state (count:115 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:1221800-1301800	Weak transcription	Rectal Smooth Muscle	rectum
2	chr12:1237400-1313800	Weak transcription	Small Intestine	intestine
3	chr12:1241200-1306400	Weak transcription	Dnd41	blood
4	chr12:1241200-1307200	Weak transcription	Duodenum Mucosa	Duodenum
5	chr12:1241400-1307800	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr12:1241800-1326600	Weak transcription	Pancreas	Pancrea
7	chr12:1263200-1306600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
8	chr12:1263400-1305800	Weak transcription	Thymus	Thymus
9	chr12:1268800-1313600	Weak transcription	Ovary	ovary
10	chr12:1276600-1305600	Weak transcription	Fetal Brain Female	brain
11	chr12:1277600-1305600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr12:1278600-1306000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr12:1281200-1301800	Weak transcription	Fetal Brain Male	brain
14	chr12:1281200-1313600	Weak transcription	Fetal Kidney	kidney
15	chr12:1282200-1313800	Weak transcription	Hela-S3	cervix
16	chr12:1283200-1305000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
17	chr12:1283200-1313600	Weak transcription	Aorta	Aorta
18	chr12:1283400-1308000	Weak transcription	Esophagus	oesophagus
19	chr12:1283400-1309600	Weak transcription	Gastric	stomach
20	chr12:1283400-1312600	Weak transcription	Brain Germinal Matrix	brain
21	chr12:1283400-1313600	Weak transcription	Right Ventricle	heart
22	chr12:1283400-1313600	Weak transcription	Skeletal Muscle Male	skeletal muscle
23	chr12:1283600-1313000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
24	chr12:1283800-1313600	Weak transcription	Brain Substantia Nigra	brain
25	chr12:1283800-1315200	Weak transcription	HSMMtube	muscle
26	chr12:1284000-1304600	Weak transcription	Pancreatic Islets	Pancreatic Islet
27	chr12:1284000-1312600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
28	chr12:1284000-1313800	Weak transcription	Brain Angular Gyrus	brain
29	chr12:1286000-1313600	Weak transcription	Psoas Muscle	Psoas
30	chr12:1287200-1312600	Weak transcription	Spleen	Spleen
31	chr12:1288000-1303400	Weak transcription	Primary neutrophils fromperipheralblood	blood
32	chr12:1290200-1306600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr12:1290800-1305400	Weak transcription	H1 Cell Line	embryonic stem cell
34	chr12:1292800-1303600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr12:1293000-1306600	Weak transcription	A549	lung
36	chr12:1293200-1305400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr12:1294400-1305600	Weak transcription	Fetal Intestine Small	intestine
38	chr12:1294400-1313600	Weak transcription	Duodenum Smooth Muscle	Duodenum
39	chr12:1294600-1306400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
40	chr12:1294600-1311600	Weak transcription	Left Ventricle	heart
41	chr12:1294800-1304200	Weak transcription	Osteobl	bone
42	chr12:1294800-1306400	Weak transcription	NH-A	brain
43	chr12:1295800-1307400	Weak transcription	HepG2	liver
44	chr12:1296000-1306400	Weak transcription	GM12878-XiMat	blood
45	chr12:1296400-1304200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
46	chr12:1296400-1306200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr12:1296600-1301600	Strong transcription	Primary B cells from peripheral blood	blood
48	chr12:1296600-1302000	Strong transcription	Primary hematopoietic stem cells	blood
49	chr12:1296800-1305600	Weak transcription	Fetal Stomach	stomach
50	chr12:1297200-1305800	Weak transcription	Placenta Amnion	Placenta Amnion

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links