Variant report

Variant rs7958662
Chromosome Location chr12:1401140-1401141
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:1334200-1425000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:1341800-1420000 Weak transcription Esophagus oesophagus
3 chr12:1364800-1408600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr12:1366600-1418000 Weak transcription Lung lung
5 chr12:1369400-1427600 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr12:1373600-1402600 Weak transcription Hela-S3 cervix
7 chr12:1373800-1410400 Weak transcription Fetal Intestine Small intestine
8 chr12:1374200-1404200 Weak transcription Left Ventricle heart
9 chr12:1374200-1423200 Weak transcription NHEK skin
10 chr12:1375200-1419800 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr12:1375400-1404200 Weak transcription Brain Inferior Temporal Lobe brain
12 chr12:1387400-1453400 Weak transcription Thymus Thymus
13 chr12:1387600-1404600 Weak transcription Fetal Heart heart
14 chr12:1387600-1441400 Weak transcription HepG2 liver
15 chr12:1391200-1434000 Weak transcription A549 lung
16 chr12:1391600-1406000 Weak transcription Osteobl bone
17 chr12:1391600-1427800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr12:1391800-1421600 Weak transcription Muscle Satellite Cultured Cells --
19 chr12:1392200-1409600 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr12:1392200-1413200 Weak transcription K562 blood
21 chr12:1392400-1404000 Weak transcription Brain Anterior Caudate brain
22 chr12:1392400-1405400 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr12:1392400-1406600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr12:1392400-1411200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr12:1392400-1414200 Weak transcription Psoas Muscle Psoas
26 chr12:1392400-1414600 Weak transcription Brain Hippocampus Middle brain
27 chr12:1392400-1422200 Weak transcription Ovary ovary
28 chr12:1392600-1403600 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr12:1392600-1415000 Weak transcription HSMMtube muscle
30 chr12:1392800-1415400 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr12:1393000-1413400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr12:1393200-1427400 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr12:1394200-1401600 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr12:1394200-1401800 Weak transcription Fetal Muscle Trunk muscle
35 chr12:1394400-1402800 Weak transcription Dnd41 blood
36 chr12:1395200-1428000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr12:1396200-1404200 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr12:1396800-1408600 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr12:1397000-1409200 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr12:1397400-1406000 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr12:1397600-1408600 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr12:1398000-1403400 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr12:1398800-1401200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr12:1398800-1401200 Strong transcription Primary T cells from cord blood blood
45 chr12:1398800-1401200 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr12:1399000-1401200 Strong transcription Primary T helper cells PMA-I stimulated --
47 chr12:1399000-1401200 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr12:1399000-1401200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr12:1399000-1401200 Strong transcription Liver Liver
50 chr12:1399000-1427600 Weak transcription Brain Angular Gyrus brain

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