Variant report

Variant rs7962697
Chromosome Location chr12:1392573-1392574
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:1334200-1425000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:1341800-1420000 Weak transcription Esophagus oesophagus
3 chr12:1343600-1398800 Weak transcription Brain Cingulate Gyrus brain
4 chr12:1360200-1396600 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr12:1364800-1408600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr12:1366600-1418000 Weak transcription Lung lung
7 chr12:1369400-1427600 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr12:1372800-1399200 Weak transcription Placenta Placenta
9 chr12:1373400-1399600 Weak transcription Fetal Intestine Large intestine
10 chr12:1373600-1398800 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr12:1373600-1399000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr12:1373600-1402600 Weak transcription Hela-S3 cervix
13 chr12:1373800-1410400 Weak transcription Fetal Intestine Small intestine
14 chr12:1374200-1404200 Weak transcription Left Ventricle heart
15 chr12:1374200-1423200 Weak transcription NHEK skin
16 chr12:1374400-1393800 Weak transcription Fetal Muscle Trunk muscle
17 chr12:1374400-1398800 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr12:1374400-1399600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr12:1375000-1398800 Weak transcription Liver Liver
20 chr12:1375000-1399600 Weak transcription HMEC breast
21 chr12:1375200-1399600 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr12:1375200-1419800 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr12:1375400-1399000 Weak transcription Primary T cells fromperipheralblood blood
24 chr12:1375400-1400000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr12:1375400-1404200 Weak transcription Brain Inferior Temporal Lobe brain
26 chr12:1376600-1399000 Weak transcription Primary B cells from peripheral blood blood
27 chr12:1376800-1399000 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr12:1379200-1398800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr12:1385000-1396800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr12:1385000-1398600 Weak transcription Primary B cells from cord blood blood
31 chr12:1385400-1399000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr12:1387400-1393600 Weak transcription Fetal Thymus thymus
33 chr12:1387400-1399000 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr12:1387400-1453400 Weak transcription Thymus Thymus
35 chr12:1387600-1404600 Weak transcription Fetal Heart heart
36 chr12:1387600-1441400 Weak transcription HepG2 liver
37 chr12:1388400-1398800 Weak transcription Primary T cells from cord blood blood
38 chr12:1388400-1399000 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr12:1389600-1394800 Enhancers Colon Smooth Muscle Colon
40 chr12:1389800-1392800 Enhancers Pancreatic Islets Pancreatic Islet
41 chr12:1390800-1392600 Enhancers HSMMtube muscle
42 chr12:1391000-1392800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr12:1391000-1392800 Enhancers Fetal Stomach stomach
44 chr12:1391000-1393800 Enhancers Fetal Brain Female brain
45 chr12:1391000-1394000 Enhancers Fetal Brain Male brain
46 chr12:1391200-1398600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr12:1391200-1434000 Weak transcription A549 lung
48 chr12:1391400-1392600 Enhancers HUES48 Cell Line embryonic stem cell
49 chr12:1391400-1398800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr12:1391600-1392800 Enhancers NHLF lung

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