The 2.0 version of rSNPBase

Variant report

Variant rs4444139
Chromosome Location chr12:1406637-1406638
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:1334200-1425000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:1341800-1420000 Weak transcription Esophagus oesophagus
3 chr12:1364800-1408600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr12:1366600-1418000 Weak transcription Lung lung
5 chr12:1369400-1427600 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr12:1373800-1410400 Weak transcription Fetal Intestine Small intestine
7 chr12:1374200-1423200 Weak transcription NHEK skin
8 chr12:1375200-1419800 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr12:1387400-1453400 Weak transcription Thymus Thymus
10 chr12:1387600-1441400 Weak transcription HepG2 liver
11 chr12:1391200-1434000 Weak transcription A549 lung
12 chr12:1391600-1427800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr12:1391800-1421600 Weak transcription Muscle Satellite Cultured Cells --
14 chr12:1392200-1409600 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr12:1392200-1413200 Weak transcription K562 blood
16 chr12:1392400-1411200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr12:1392400-1414200 Weak transcription Psoas Muscle Psoas
18 chr12:1392400-1414600 Weak transcription Brain Hippocampus Middle brain
19 chr12:1392400-1422200 Weak transcription Ovary ovary
20 chr12:1392600-1415000 Weak transcription HSMMtube muscle
21 chr12:1392800-1415400 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr12:1393000-1413400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr12:1393200-1427400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr12:1395200-1428000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr12:1396800-1408600 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr12:1397000-1409200 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr12:1397600-1408600 Weak transcription HUES48 Cell Line embryonic stem cell
28 chr12:1399000-1427600 Weak transcription Brain Angular Gyrus brain
29 chr12:1399000-1428400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr12:1399200-1416200 Weak transcription Brain Cingulate Gyrus brain
31 chr12:1399400-1409200 Weak transcription Duodenum Mucosa Duodenum
32 chr12:1399600-1409200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr12:1399600-1426600 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr12:1399800-1416400 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr12:1400000-1427600 Weak transcription Placenta Placenta
36 chr12:1400400-1426800 Weak transcription HMEC breast
37 chr12:1400400-1427200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr12:1400400-1427200 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr12:1400600-1408800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr12:1400600-1408800 Weak transcription Fetal Muscle Leg muscle
41 chr12:1400600-1425200 Weak transcription Primary T cells fromperipheralblood blood
42 chr12:1400800-1408600 Weak transcription Fetal Intestine Large intestine
43 chr12:1400800-1413000 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr12:1400800-1421400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr12:1401000-1411600 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr12:1401000-1413600 Weak transcription Adipose Nuclei Adipose
47 chr12:1401000-1427400 Weak transcription HSMM muscle
48 chr12:1401200-1409200 Weak transcription Fetal Brain Female brain
49 chr12:1401200-1418000 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr12:1401200-1425400 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015