The 2.0 version of rSNPBase

Variant report

Variant rs12422537
Chromosome Location chr12:1496842-1496843
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:1428200-1500400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr12:1439000-1497800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr12:1450000-1500000 Weak transcription Spleen Spleen
4 chr12:1473200-1500400 Weak transcription Right Ventricle heart
5 chr12:1477000-1500000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr12:1477200-1500000 Weak transcription Fetal Kidney kidney
7 chr12:1477400-1499800 Weak transcription HSMM muscle
8 chr12:1477800-1499800 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr12:1478400-1520400 Weak transcription Pancreas Pancrea
10 chr12:1478800-1500600 Weak transcription HSMMtube muscle
11 chr12:1478800-1500800 Weak transcription Small Intestine intestine
12 chr12:1479000-1499800 Weak transcription A549 lung
13 chr12:1479000-1500000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr12:1479000-1502400 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr12:1479400-1500000 Weak transcription Ovary ovary
16 chr12:1479600-1500000 Weak transcription Gastric stomach
17 chr12:1479800-1497600 Weak transcription Brain Hippocampus Middle brain
18 chr12:1480200-1500000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr12:1481400-1500000 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr12:1481400-1520000 Weak transcription Thymus Thymus
21 chr12:1482000-1499800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr12:1482600-1498000 Weak transcription Brain Angular Gyrus brain
23 chr12:1483400-1499600 Weak transcription HMEC breast
24 chr12:1484000-1499800 Weak transcription Stomach Smooth Muscle stomach
25 chr12:1484200-1500200 Weak transcription Colon Smooth Muscle Colon
26 chr12:1484400-1500200 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr12:1484800-1498600 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr12:1484800-1500600 Weak transcription Primary T cells fromperipheralblood blood
29 chr12:1485600-1501400 Weak transcription Primary monocytes fromperipheralblood blood
30 chr12:1486200-1518400 Weak transcription Primary B cells from peripheral blood blood
31 chr12:1486400-1499800 Weak transcription Primary hematopoietic stem cells blood
32 chr12:1486600-1497600 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr12:1486600-1499800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr12:1486600-1499800 Weak transcription Fetal Intestine Large intestine
35 chr12:1486600-1500600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr12:1486800-1500000 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr12:1486800-1500000 Weak transcription Rectal Smooth Muscle rectum
38 chr12:1486800-1530400 Weak transcription Fetal Lung lung
39 chr12:1487600-1497600 Weak transcription Brain Substantia Nigra brain
40 chr12:1489200-1500600 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr12:1489600-1500400 Weak transcription Fetal Brain Female brain
42 chr12:1489600-1500400 Weak transcription Fetal Muscle Leg muscle
43 chr12:1489600-1500400 Weak transcription Left Ventricle heart
44 chr12:1489800-1497000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr12:1489800-1497600 Weak transcription Aorta Aorta
46 chr12:1489800-1499800 Weak transcription Primary B cells from cord blood blood
47 chr12:1489800-1499800 Weak transcription Primary T cells from cord blood blood
48 chr12:1489800-1499800 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr12:1489800-1499800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr12:1489800-1500000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015