The 2.0 version of rSNPBase

Variant report

Variant rs4631941
Chromosome Location chr12:1485216-1485217
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:1428200-1500400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr12:1439000-1497800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr12:1450000-1500000 Weak transcription Spleen Spleen
4 chr12:1457600-1489000 Weak transcription Duodenum Mucosa Duodenum
5 chr12:1460200-1485600 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr12:1460200-1485600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr12:1465400-1489000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr12:1471800-1487200 Weak transcription Muscle Satellite Cultured Cells --
9 chr12:1472000-1487800 Weak transcription K562 blood
10 chr12:1473200-1500400 Weak transcription Right Ventricle heart
11 chr12:1475600-1496800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr12:1476200-1488600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr12:1477000-1486200 Weak transcription HepG2 liver
14 chr12:1477000-1489400 Weak transcription Brain Anterior Caudate brain
15 chr12:1477000-1489400 Weak transcription Fetal Brain Male brain
16 chr12:1477000-1489400 Weak transcription Lung lung
17 chr12:1477000-1500000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr12:1477200-1489000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr12:1477200-1500000 Weak transcription Fetal Kidney kidney
20 chr12:1477400-1499800 Weak transcription HSMM muscle
21 chr12:1477800-1496800 Weak transcription Brain Cingulate Gyrus brain
22 chr12:1477800-1499800 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr12:1478400-1520400 Weak transcription Pancreas Pancrea
24 chr12:1478600-1485600 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr12:1478800-1500600 Weak transcription HSMMtube muscle
26 chr12:1478800-1500800 Weak transcription Small Intestine intestine
27 chr12:1479000-1489000 Weak transcription HUVEC blood vessel
28 chr12:1479000-1499800 Weak transcription A549 lung
29 chr12:1479000-1500000 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr12:1479000-1502400 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr12:1479200-1487600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr12:1479200-1488400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr12:1479400-1489200 Weak transcription Fetal Muscle Trunk muscle
34 chr12:1479400-1489600 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr12:1479400-1500000 Weak transcription Ovary ovary
36 chr12:1479600-1489200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr12:1479600-1489800 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr12:1479600-1492200 Weak transcription Fetal Thymus thymus
39 chr12:1479600-1500000 Weak transcription Gastric stomach
40 chr12:1479800-1497600 Weak transcription Brain Hippocampus Middle brain
41 chr12:1480200-1500000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr12:1480400-1486800 Strong transcription Primary T cells from cord blood blood
43 chr12:1480400-1488600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr12:1480800-1486200 Strong transcription Primary B cells from peripheral blood blood
45 chr12:1481000-1486200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr12:1481400-1490800 Weak transcription Fetal Heart heart
47 chr12:1481400-1500000 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr12:1481400-1520000 Weak transcription Thymus Thymus
49 chr12:1481600-1486600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr12:1481800-1485600 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015