Variant report

Variant	rs11061714
Chromosome Location	chr12:1478570-1478571
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:1477160..1479008-chr12:1480395..1483486,3	K562	blood:
2	chr12:1474380..1476005-chr12:1477724..1479472,2	MCF-7	breast:

Extended variants
information (count: 162 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:135)

rs_ID	r²[population]
rs1005394	1.00[CHB][hapmap];0.84[CHD][hapmap];0.87[ASN][1000 genomes]
rs1012719	0.93[ASN][1000 genomes]
rs10161285	0.82[CHB][hapmap]
rs10773938	0.88[CHB][hapmap];0.83[AMR][1000 genomes]
rs10773941	0.88[CHB][hapmap];0.83[AMR][1000 genomes]
rs10848456	0.82[CEU][hapmap];0.89[CHB][hapmap]
rs10848458	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10848460	0.81[AFR][1000 genomes]
rs10848461	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs10848462	0.83[AMR][1000 genomes]
rs10848463	0.83[AMR][1000 genomes]
rs10848464	0.83[AMR][1000 genomes]
rs10848465	0.83[AMR][1000 genomes]
rs10848466	0.81[CEU][hapmap];0.88[CHB][hapmap];0.84[JPT][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10848467	0.83[AMR][1000 genomes]
rs10848468	0.88[CHB][hapmap];0.83[AMR][1000 genomes]
rs10848469	0.82[AMR][1000 genomes]
rs11061677	0.81[CEU][hapmap];0.88[CHB][hapmap];0.81[GIH][hapmap]
rs11061679	0.84[CEU][hapmap];0.88[CHB][hapmap];0.81[GIH][hapmap];0.80[TSI][hapmap];0.80[EUR][1000 genomes]
rs11061682	0.81[CEU][hapmap];0.89[CHB][hapmap];0.80[EUR][1000 genomes]
rs11061691	0.81[CEU][hapmap];0.89[CHB][hapmap];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11061698	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11061705	0.87[ASN][1000 genomes]
rs11061707	1.00[CHB][hapmap];0.87[ASN][1000 genomes]
rs11061712	0.96[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11061718	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11061719	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11061720	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11061721	0.83[ASW][hapmap];0.88[CHB][hapmap];0.81[MKK][hapmap];0.87[YRI][hapmap];0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11061722	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11061723	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11061724	0.88[CHB][hapmap];0.83[AMR][1000 genomes]
rs11061727	0.83[AMR][1000 genomes]
rs11061728	0.83[AMR][1000 genomes]
rs11061729	0.88[CHB][hapmap];0.82[AMR][1000 genomes]
rs11061730	0.82[AMR][1000 genomes]
rs11061731	0.86[CHB][hapmap];0.82[AMR][1000 genomes]
rs11061732	0.88[CHB][hapmap];0.82[AMR][1000 genomes]
rs11061733	0.88[CHB][hapmap];0.82[AMR][1000 genomes]
rs11061734	0.88[CHB][hapmap];0.82[AMR][1000 genomes]
rs11061735	0.88[CHB][hapmap];0.80[AMR][1000 genomes]
rs11061736	0.94[CHB][hapmap]
rs11061737	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];1.00[TSI][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11061741	0.88[CHB][hapmap]
rs11061743	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11613252	0.88[CHB][hapmap]
rs11836372	0.82[CHB][hapmap]
rs11837688	1.00[CHB][hapmap];0.84[CHD][hapmap];0.87[ASN][1000 genomes]
rs12298813	0.85[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.93[TSI][hapmap];0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12301879	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12301937	0.88[CHB][hapmap]
rs12303877	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12305871	0.88[CHB][hapmap]
rs12306160	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12307046	0.88[CHB][hapmap]
rs12308521	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12312647	0.86[CHB][hapmap]
rs12314672	0.87[CHB][hapmap]
rs12316687	0.88[CHB][hapmap]
rs12317763	0.82[CHB][hapmap]
rs12320120	0.83[AMR][1000 genomes]
rs12320293	0.81[CEU][hapmap];0.82[CHB][hapmap];0.81[GIH][hapmap];0.84[JPT][hapmap];0.90[MEX][hapmap];0.83[TSI][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12320911	0.93[ASN][1000 genomes]
rs12321617	0.82[AMR][1000 genomes]
rs12321803	0.88[CHB][hapmap]
rs12423105	1.00[CHB][hapmap];0.88[CHD][hapmap];0.80[TSI][hapmap];0.93[ASN][1000 genomes]
rs12425175	0.83[ASW][hapmap];0.88[CHB][hapmap];0.81[MKK][hapmap];0.87[YRI][hapmap];0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs12426509	0.82[CHB][hapmap]
rs1362265	0.88[CHB][hapmap]
rs1362266	0.82[CHB][hapmap]
rs1419965	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1476908	0.82[CHB][hapmap]
rs1544425	0.82[CHB][hapmap]
rs1548805	0.88[CHB][hapmap]
rs1548806	0.88[CHB][hapmap];0.80[AMR][1000 genomes]
rs16928347	0.84[CEU][hapmap];0.84[CHB][hapmap];0.84[TSI][hapmap];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16928381	0.88[CHB][hapmap];0.83[AMR][1000 genomes]
rs16928383	0.80[CEU][hapmap];0.88[CHB][hapmap];0.83[JPT][hapmap];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs16928393	0.88[CHB][hapmap];0.83[AMR][1000 genomes]
rs17800876	0.82[CHB][hapmap]
rs2051842	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2051843	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2051844	0.88[CHB][hapmap]
rs2052184	0.81[AFR][1000 genomes]
rs2052185	0.88[CHB][hapmap];0.87[YRI][hapmap];0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2286031	0.81[GIH][hapmap];0.80[TSI][hapmap]
rs2286037	0.82[CHB][hapmap]
rs34929071	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35579512	0.87[ASN][1000 genomes]
rs41369952	0.88[CHB][hapmap]
rs4562882	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4631941	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs57707051	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58639324	0.93[ASN][1000 genomes]
rs59141976	0.93[ASN][1000 genomes]
rs61913073	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs61913097	0.87[ASN][1000 genomes]
rs61913099	0.93[ASN][1000 genomes]
rs61913128	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6489277	0.81[CEU][hapmap];0.89[CHB][hapmap];0.81[GIH][hapmap]
rs6489282	1.00[CHB][hapmap];0.88[CHD][hapmap];0.80[TSI][hapmap];0.93[ASN][1000 genomes]
rs6489284	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7136329	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7300575	0.84[CEU][hapmap];0.84[CHB][hapmap];0.85[GIH][hapmap];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7300981	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs73038635	0.87[ASN][1000 genomes]
rs73038647	0.87[ASN][1000 genomes]
rs7304258	0.80[EUR][1000 genomes]
rs7306130	0.81[CEU][hapmap];0.84[CHB][hapmap];0.83[GIH][hapmap]
rs7311231	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7313311	1.00[CHB][hapmap];0.80[CHD][hapmap];0.87[ASN][1000 genomes]
rs7488294	0.84[JPT][hapmap]
rs766956	1.00[CHB][hapmap];0.88[CHD][hapmap];0.80[TSI][hapmap];0.93[ASN][1000 genomes]
rs768157	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7954162	0.93[ASN][1000 genomes]
rs7955591	0.82[AMR][1000 genomes]
rs7956588	0.87[ASN][1000 genomes]
rs7956798	0.87[ASN][1000 genomes]
rs7958662	0.81[CEU][hapmap];0.88[CHB][hapmap];0.81[EUR][1000 genomes]
rs7963546	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7963602	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7968223	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7968583	0.96[CEU][hapmap];1.00[CHB][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7968772	0.89[ASN][1000 genomes]
rs7969569	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7971670	0.82[CHB][hapmap]
rs7972088	0.87[ASN][1000 genomes]
rs7972290	0.81[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7973734	0.80[CEU][hapmap];0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7975854	0.84[CEU][hapmap];0.84[CHB][hapmap];0.83[GIH][hapmap];0.85[TSI][hapmap];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7978540	0.96[CEU][hapmap];1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7978898	0.96[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.98[TSI][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7980065	0.81[CHB][hapmap];0.81[GIH][hapmap]
rs956408	0.88[CHB][hapmap]
rs9943818	0.81[CEU][hapmap];0.84[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898576	chr12:813411-1553450	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
2	nsv948760	chr12:863833-1542875	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
3	nsv1045278	chr12:920251-1697030	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
4	nsv529398	chr12:941915-1741311	Weak transcription Strong transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
5	nsv898579	chr12:1013176-1510505	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
6	nsv898580	chr12:1024688-1569097	Weak transcription Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
7	esv2762958	chr12:1049279-1554962	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
8	nsv1052559	chr12:1077964-1588543	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
9	nsv898581	chr12:1084783-1527359	Flanking Active TSS Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
10	nsv1046134	chr12:1153489-1675223	Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
11	nsv541344	chr12:1153489-1675223	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
12	nsv1042863	chr12:1163817-1902302	Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
13	nsv541345	chr12:1163817-1902302	Strong transcription Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
14	nsv1039826	chr12:1259831-1483326	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
15	nsv1050361	chr12:1274052-1541558	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
16	nsv556944	chr12:1308553-1569097	Weak transcription Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
17	nsv898583	chr12:1314430-1507616	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
18	nsv470257	chr12:1314430-1514021	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
19	nsv1054178	chr12:1372157-1682699	Enhancers Strong transcription Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
20	nsv541347	chr12:1372157-1682699	Bivalent Enhancer Enhancers Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
21	nsv1035935	chr12:1400974-1608625	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
22	nsv1039946	chr12:1429190-1548852	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
23	nsv1044918	chr12:1432740-1584649	ZNF genes & repeats Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
24	nsv541348	chr12:1432740-1584649	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
25	nsv556949	chr12:1437726-1514021	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
26	nsv1046515	chr12:1440896-1588543	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
27	nsv975621	chr12:1477974-1481966	Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:78 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:1428200-1500400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr12:1439000-1497800	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr12:1441000-1480200	Weak transcription	Primary hematopoietic stem cells	blood
4	chr12:1442600-1480800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr12:1444200-1481000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr12:1449800-1484400	Weak transcription	Esophagus	oesophagus
7	chr12:1450000-1480400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
8	chr12:1450000-1484200	Weak transcription	Aorta	Aorta
9	chr12:1450000-1500000	Weak transcription	Spleen	Spleen
10	chr12:1455400-1481200	Weak transcription	Brain Angular Gyrus	brain
11	chr12:1457600-1489000	Weak transcription	Duodenum Mucosa	Duodenum
12	chr12:1460200-1478600	Weak transcription	Psoas Muscle	Psoas
13	chr12:1460200-1485000	Weak transcription	Fetal Intestine Small	intestine
14	chr12:1460200-1485600	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr12:1460200-1485600	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr12:1461400-1480200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr12:1461400-1483800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr12:1461600-1481600	Weak transcription	HMEC	breast
19	chr12:1464800-1478600	Weak transcription	Fetal Muscle Leg	muscle
20	chr12:1465400-1479800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr12:1465400-1489000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr12:1466600-1483000	Weak transcription	Fetal Stomach	stomach
23	chr12:1466800-1483200	Weak transcription	NHLF	lung
24	chr12:1467400-1481000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr12:1470000-1482800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr12:1470400-1481800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
27	chr12:1470800-1482800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr12:1471000-1480800	Weak transcription	Primary T helper cells fromperipheralblood	blood
29	chr12:1471800-1487200	Weak transcription	Muscle Satellite Cultured Cells	--
30	chr12:1472000-1487800	Weak transcription	K562	blood
31	chr12:1473200-1481000	Weak transcription	Right Atrium	heart
32	chr12:1473200-1500400	Weak transcription	Right Ventricle	heart
33	chr12:1473400-1485000	Weak transcription	Left Ventricle	heart
34	chr12:1474000-1483800	Weak transcription	Primary B cells from cord blood	blood
35	chr12:1474200-1480400	Weak transcription	Primary T cells from cord blood	blood
36	chr12:1475200-1481000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
37	chr12:1475200-1482200	Weak transcription	NHEK	skin
38	chr12:1475600-1496800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
39	chr12:1476200-1488600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
40	chr12:1476600-1479200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr12:1476800-1478800	Enhancers	Adipose Nuclei	Adipose
42	chr12:1476800-1479200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr12:1477000-1478600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
44	chr12:1477000-1478600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
45	chr12:1477000-1478600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
46	chr12:1477000-1480200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
47	chr12:1477000-1486200	Weak transcription	HepG2	liver
48	chr12:1477000-1489400	Weak transcription	Brain Anterior Caudate	brain
49	chr12:1477000-1489400	Weak transcription	Fetal Brain Male	brain
50	chr12:1477000-1489400	Weak transcription	Lung	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links