The 2.0 version of rSNPBase

Variant report

Variant rs17235719
Chromosome Location chr3:56813143-56813144
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56764000-56815800 Weak transcription Fetal Intestine Small intestine
2 chr3:56793200-56817400 Weak transcription Hela-S3 cervix
3 chr3:56796800-56816400 Weak transcription Colonic Mucosa Colon
4 chr3:56799000-56815800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:56805800-56816800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr3:56806400-56815800 Weak transcription Esophagus oesophagus
7 chr3:56806400-56816800 Weak transcription Duodenum Mucosa Duodenum
8 chr3:56806400-56817000 Weak transcription NHEK skin
9 chr3:56807000-56833200 Weak transcription Placenta Amnion Placenta Amnion
10 chr3:56807400-56814000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr3:56807400-56814600 Genic enhancers Primary T cells fromperipheralblood blood
12 chr3:56807400-56816000 Weak transcription Fetal Intestine Large intestine
13 chr3:56807600-56818000 Weak transcription Fetal Muscle Trunk muscle
14 chr3:56807800-56817400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr3:56808000-56815800 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr3:56808000-56815800 Weak transcription HUVEC blood vessel
17 chr3:56808200-56816800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr3:56808600-56816800 Enhancers Primary T killer naive cells fromperipheralblood blood
19 chr3:56809000-56816800 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr3:56809400-56815800 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr3:56809600-56813800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr3:56810000-56815800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr3:56810000-56816600 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr3:56810000-56822200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr3:56810200-56817000 Enhancers Primary T helper cells fromperipheralblood blood
26 chr3:56810400-56815000 Weak transcription Thymus Thymus
27 chr3:56810400-56815400 Weak transcription Psoas Muscle Psoas
28 chr3:56810400-56816000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr3:56810400-56816400 Weak transcription Primary hematopoietic stem cells blood
30 chr3:56810400-56816400 Weak transcription Fetal Muscle Leg muscle
31 chr3:56810400-56817000 Weak transcription Right Ventricle heart
32 chr3:56810400-56817000 Weak transcription Spleen Spleen
33 chr3:56810400-56818000 Weak transcription Placenta Placenta
34 chr3:56810400-56819000 Weak transcription Fetal Brain Female brain
35 chr3:56810600-56815800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr3:56810600-56815800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr3:56810800-56816200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr3:56810800-56816400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr3:56811000-56814200 Weak transcription Colon Smooth Muscle Colon
40 chr3:56811000-56815600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr3:56811000-56815800 Weak transcription Brain Hippocampus Middle brain
42 chr3:56811000-56815800 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr3:56811000-56815800 Weak transcription HMEC breast
44 chr3:56811000-56816400 Weak transcription Brain Anterior Caudate brain
45 chr3:56811000-56816400 Weak transcription Fetal Lung lung
46 chr3:56811200-56814000 Enhancers Primary T regulatory cells fromperipheralblood blood
47 chr3:56811200-56815800 Weak transcription Fetal Kidney kidney
48 chr3:56811400-56813200 Enhancers Left Ventricle heart
49 chr3:56811400-56814200 Enhancers Primary B cells from peripheral blood blood
50 chr3:56811400-56814400 Enhancers Primary monocytes fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015