The 2.0 version of rSNPBase

Variant report

Variant rs17239026
Chromosome Location chr19:37568536-37568537
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:37566000-37568600 Weak transcription Left Ventricle heart
2 chr19:37567800-37569000 ZNF genes & repeats A549 lung
3 chr19:37567800-37569600 Active TSS Primary hematopoietic stem cells short term culture blood
4 chr19:37567800-37570000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr19:37567800-37570200 Active TSS Psoas Muscle Psoas
6 chr19:37568000-37568600 Active TSS Primary B cells from cord blood blood
7 chr19:37568000-37568600 Enhancers Primary T killer memory cells from peripheral blood blood
8 chr19:37568000-37568600 Flanking Active TSS Dnd41 blood
9 chr19:37568000-37569000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr19:37568000-37569400 Active TSS Fetal Lung lung
11 chr19:37568000-37569600 Active TSS Fetal Brain Female brain
12 chr19:37568000-37569800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
13 chr19:37568000-37569800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr19:37568000-37570000 Active TSS HSMMtube muscle
15 chr19:37568000-37570200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr19:37568000-37570600 Active TSS HUES48 Cell Line embryonic stem cell
17 chr19:37568200-37568600 Enhancers Primary T helper cells fromperipheralblood blood
18 chr19:37568200-37568600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
19 chr19:37568200-37568600 Flanking Active TSS Fetal Kidney kidney
20 chr19:37568200-37568600 Active TSS HepG2 liver
21 chr19:37568200-37568800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr19:37568200-37569600 Active TSS GM12878-XiMat blood
23 chr19:37568200-37569600 Active TSS HMEC breast
24 chr19:37568200-37569800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
25 chr19:37568200-37569800 Active TSS Brain Hippocampus Middle brain
26 chr19:37568200-37570000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr19:37568200-37570000 Active TSS Muscle Satellite Cultured Cells --
28 chr19:37568200-37570000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
29 chr19:37568200-37570000 Active TSS NHLF lung
30 chr19:37568200-37570200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr19:37568200-37570600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr19:37568200-37570600 Active TSS HUES64 Cell Line embryonic stem cell
33 chr19:37568200-37570600 Active TSS iPS-18 Cell Line embryonic stem cell
34 chr19:37568200-37570600 Active TSS Pancreatic Islets Pancreatic Islet
35 chr19:37568400-37568600 Active TSS iPS-20b Cell Line embryonic stem cell
36 chr19:37568400-37568600 Enhancers Primary monocytes fromperipheralblood blood
37 chr19:37568400-37568600 Enhancers Primary B cells from peripheral blood blood
38 chr19:37568400-37568600 Active TSS Primary T cells from cord blood blood
39 chr19:37568400-37568600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
40 chr19:37568400-37568600 Enhancers Primary T helper naive cells fromperipheralblood blood
41 chr19:37568400-37568600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
42 chr19:37568400-37568600 Enhancers Primary T helper 17 cells PMA-I stimulated --
43 chr19:37568400-37568600 Enhancers Primary T regulatory cells fromperipheralblood blood
44 chr19:37568400-37568600 Enhancers Primary T killer naive cells fromperipheralblood blood
45 chr19:37568400-37568600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
46 chr19:37568400-37568600 Enhancers Primary mononuclear cells fromperipheralblood Blood
47 chr19:37568400-37568600 Flanking Active TSS Brain Cingulate Gyrus brain
48 chr19:37568400-37568800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
49 chr19:37568400-37568800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr19:37568400-37568800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015