Variant report

Variant rs1724589
Chromosome Location chr15:52740956-52740957
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52730400-52744600 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr15:52730600-52741600 Weak transcription Ovary ovary
3 chr15:52730600-52741600 Weak transcription HUVEC blood vessel
4 chr15:52730600-52741800 Weak transcription Gastric stomach
5 chr15:52730800-52741800 Weak transcription Primary B cells from peripheral blood blood
6 chr15:52732600-52750600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr15:52734400-52743800 Weak transcription Brain Angular Gyrus brain
8 chr15:52734600-52741600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr15:52734600-52753200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr15:52734800-52743800 Weak transcription Brain Inferior Temporal Lobe brain
11 chr15:52734800-52747400 Weak transcription HSMM muscle
12 chr15:52737200-52742000 Enhancers Adipose Nuclei Adipose
13 chr15:52738000-52743800 Weak transcription Brain Anterior Caudate brain
14 chr15:52738200-52741600 Weak transcription Pancreas Pancrea
15 chr15:52738600-52741600 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr15:52738800-52741800 Weak transcription Psoas Muscle Psoas
17 chr15:52738800-52744600 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr15:52739000-52741800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr15:52739000-52751800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr15:52739000-52753600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr15:52739600-52742200 Enhancers Right Atrium heart
22 chr15:52740000-52741000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr15:52740000-52741200 Enhancers Brain Cingulate Gyrus brain
24 chr15:52740200-52741000 Enhancers H1 Cell Line embryonic stem cell
25 chr15:52740200-52741000 Enhancers H9 Cell Line embryonic stem cell
26 chr15:52740200-52741000 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr15:52740200-52741000 Enhancers iPS-20b Cell Line embryonic stem cell
28 chr15:52740200-52741000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
29 chr15:52740200-52741000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr15:52740200-52741000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr15:52740200-52741400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
32 chr15:52740200-52742200 Enhancers HUES48 Cell Line embryonic stem cell
33 chr15:52740200-52742400 Enhancers Left Ventricle heart
34 chr15:52740400-52741600 Weak transcription Brain Substantia Nigra brain
35 chr15:52740400-52741800 Enhancers iPS-18 Cell Line embryonic stem cell
36 chr15:52740400-52742000 Weak transcription Spleen Spleen
37 chr15:52740400-52756200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr15:52740600-52741000 Enhancers HUES6 Cell Line embryonic stem cell
39 chr15:52740600-52741000 Enhancers HUES64 Cell Line embryonic stem cell
40 chr15:52740600-52741000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr15:52740600-52741600 Weak transcription Right Ventricle heart
42 chr15:52740600-52741600 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr15:52740600-52744200 Weak transcription Brain Hippocampus Middle brain
44 chr15:52740600-52753200 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr15:52740800-52741000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
46 chr15:52740800-52742400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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