Variant report

Variant rs17265364
Chromosome Location chr1:61748240-61748241
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61720800-61755800 Weak transcription Fetal Intestine Small intestine
2 chr1:61721000-61754400 Weak transcription Pancreas Pancrea
3 chr1:61725800-61750400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr1:61729600-61754400 Weak transcription Lung lung
5 chr1:61732800-61750000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:61737000-61750000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:61737200-61751600 Weak transcription Hela-S3 cervix
8 chr1:61737400-61750000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr1:61737400-61751800 Weak transcription Esophagus oesophagus
10 chr1:61737600-61750200 Weak transcription NHEK skin
11 chr1:61738000-61752600 Weak transcription HUVEC blood vessel
12 chr1:61743200-61752600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr1:61743400-61749600 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr1:61743400-61754400 Weak transcription Aorta Aorta
15 chr1:61743400-61756400 Weak transcription Right Ventricle heart
16 chr1:61744600-61750000 Weak transcription Fetal Stomach stomach
17 chr1:61744600-61798600 Weak transcription Fetal Muscle Trunk muscle
18 chr1:61745600-61750000 Weak transcription Fetal Muscle Leg muscle
19 chr1:61745600-61750800 Weak transcription Brain Germinal Matrix brain
20 chr1:61745800-61749600 Weak transcription H1 Cell Line embryonic stem cell
21 chr1:61745800-61750600 Weak transcription Adipose Nuclei Adipose
22 chr1:61746000-61749600 Weak transcription Brain Anterior Caudate brain
23 chr1:61746000-61749800 Weak transcription GM12878-XiMat blood
24 chr1:61746000-61750800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr1:61746000-61751000 Weak transcription Brain Hippocampus Middle brain
26 chr1:61746000-61751400 Weak transcription Brain Angular Gyrus brain
27 chr1:61746000-61751600 Weak transcription Brain Substantia Nigra brain
28 chr1:61746000-61752200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr1:61746000-61753200 Weak transcription Rectal Smooth Muscle rectum
30 chr1:61746200-61749800 Weak transcription Fetal Brain Male brain
31 chr1:61746400-61750800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:61746400-61754600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:61747000-61754000 Enhancers Cortex derived primary cultured neurospheres brain
34 chr1:61747200-61749200 Enhancers Psoas Muscle Psoas
35 chr1:61747600-61748400 Enhancers HepG2 liver
36 chr1:61747600-61748800 Enhancers Liver Liver
37 chr1:61747800-61748400 Enhancers ES-I3 Cell Line embryonic stem cell
38 chr1:61747800-61748400 Enhancers Left Ventricle heart
39 chr1:61747800-61748800 Enhancers Fetal Heart heart
40 chr1:61747800-61749000 Enhancers A549 lung
41 chr1:61748000-61748400 Enhancers HUES48 Cell Line embryonic stem cell
42 chr1:61748000-61748400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr1:61748000-61748400 Enhancers Colon Smooth Muscle Colon
44 chr1:61748000-61748600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr1:61748000-61748800 Enhancers iPS-15b Cell Line embryonic stem cell
46 chr1:61748000-61749000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:61748200-61748400 Enhancers iPS-20b Cell Line embryonic stem cell
48 chr1:61748200-61748600 Weak transcription Muscle Satellite Cultured Cells --
49 chr1:61748200-61748600 Weak transcription Fetal Brain Female brain
50 chr1:61748200-61748800 Enhancers ES-UCSF4 Cell Line embryonic stem cell

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