Variant report

Variant rs172662
Chromosome Location chr2:33243429-33243430
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33237600-33246000 Weak transcription Brain Germinal Matrix brain
2 chr2:33239600-33245800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:33239600-33246000 Weak transcription Aorta Aorta
4 chr2:33239600-33246000 Weak transcription Fetal Kidney kidney
5 chr2:33239800-33245800 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr2:33239800-33245800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr2:33239800-33246000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr2:33240000-33245800 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr2:33240000-33246000 Weak transcription NH-A brain
10 chr2:33240400-33244200 Enhancers Fetal Heart heart
11 chr2:33240400-33246000 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr2:33240400-33246400 Weak transcription Stomach Smooth Muscle stomach
13 chr2:33240600-33244200 Enhancers A549 lung
14 chr2:33241200-33248000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
15 chr2:33241200-33249800 Weak transcription Esophagus oesophagus
16 chr2:33241400-33245800 Weak transcription Fetal Intestine Large intestine
17 chr2:33241400-33246200 Weak transcription NHLF lung
18 chr2:33241400-33246800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr2:33241400-33246800 Weak transcription Muscle Satellite Cultured Cells --
20 chr2:33241400-33246800 Weak transcription Placenta Amnion Placenta Amnion
21 chr2:33241400-33247000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr2:33241400-33247000 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr2:33241600-33246800 Weak transcription Osteobl bone
24 chr2:33241800-33245600 Weak transcription Fetal Intestine Small intestine
25 chr2:33241800-33247600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr2:33241800-33248000 Weak transcription Duodenum Mucosa Duodenum
27 chr2:33241800-33248600 Weak transcription Small Intestine intestine
28 chr2:33241800-33248600 Weak transcription Stomach Mucosa stomach
29 chr2:33241800-33249600 Weak transcription Fetal Muscle Leg muscle
30 chr2:33242200-33249600 Weak transcription Liver Liver
31 chr2:33242400-33243800 Enhancers Right Atrium heart
32 chr2:33242600-33248600 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr2:33242600-33249600 Weak transcription Right Ventricle heart
34 chr2:33243000-33244000 Enhancers HepG2 liver
35 chr2:33243000-33244200 Enhancers HSMMtube muscle
36 chr2:33243000-33244400 Enhancers NHDF-Ad bronchial
37 chr2:33243200-33243800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr2:33243200-33243800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr2:33243200-33243800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
40 chr2:33243400-33243600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr2:33243400-33243600 Enhancers Fetal Muscle Trunk muscle
42 chr2:33243400-33243800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr2:33243400-33243800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr2:33243400-33244000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
45 chr2:33243400-33244000 Enhancers Left Ventricle heart
46 chr2:33243400-33245000 Enhancers K562 blood

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