Variant report

Variant rs219184
Chromosome Location chr2:33240293-33240294
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33218200-33241000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:33226600-33240800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:33237200-33241200 Weak transcription Right Ventricle heart
4 chr2:33237600-33240800 Weak transcription Placenta Amnion Placenta Amnion
5 chr2:33237600-33246000 Weak transcription Brain Germinal Matrix brain
6 chr2:33238800-33240600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr2:33238800-33240600 Enhancers Skeletal Muscle Female skeletal muscle
8 chr2:33238800-33240600 Flanking Active TSS A549 lung
9 chr2:33238800-33240600 Enhancers HMEC breast
10 chr2:33238800-33240800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
11 chr2:33238800-33241200 Enhancers Psoas Muscle Psoas
12 chr2:33238800-33241400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr2:33238800-33241400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr2:33238800-33241400 Enhancers Left Ventricle heart
15 chr2:33238800-33241400 Enhancers Right Atrium heart
16 chr2:33238800-33241400 Enhancers NHDF-Ad bronchial
17 chr2:33238800-33241600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr2:33238800-33241600 Enhancers Fetal Intestine Small intestine
19 chr2:33238800-33241600 Enhancers Rectal Mucosa Donor 31 rectum
20 chr2:33238800-33241600 Enhancers Osteobl bone
21 chr2:33238800-33241800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr2:33238800-33241800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
23 chr2:33238800-33241800 Enhancers Fetal Muscle Leg muscle
24 chr2:33238800-33241800 Enhancers Stomach Mucosa stomach
25 chr2:33239000-33240400 Enhancers Skeletal Muscle Male skeletal muscle
26 chr2:33239000-33240800 Enhancers Muscle Satellite Cultured Cells --
27 chr2:33239000-33241800 Enhancers Duodenum Mucosa Duodenum
28 chr2:33239000-33241800 Enhancers Small Intestine intestine
29 chr2:33239200-33241000 Enhancers Adipose Nuclei Adipose
30 chr2:33239200-33241400 Enhancers NHLF lung
31 chr2:33239200-33242200 Enhancers Liver Liver
32 chr2:33239200-33243400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr2:33239400-33241200 Enhancers HepG2 liver
34 chr2:33239400-33241600 Enhancers K562 blood
35 chr2:33239600-33240400 Flanking Active TSS Fetal Heart heart
36 chr2:33239600-33240400 Enhancers Stomach Smooth Muscle stomach
37 chr2:33239600-33240800 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr2:33239600-33241400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr2:33239600-33241400 Enhancers Fetal Intestine Large intestine
40 chr2:33239600-33245800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr2:33239600-33246000 Weak transcription Aorta Aorta
42 chr2:33239600-33246000 Weak transcription Fetal Kidney kidney
43 chr2:33239800-33240800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr2:33239800-33243200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr2:33239800-33243400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr2:33239800-33245800 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr2:33239800-33245800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr2:33239800-33246000 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr2:33240000-33241400 Enhancers Colonic Mucosa Colon
50 chr2:33240000-33245800 Weak transcription Cortex derived primary cultured neurospheres brain

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