The 2.0 version of rSNPBase

Variant report

Variant rs17283027
Chromosome Location chr4:104086578-104086579
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:104021000-104089600 Weak transcription Fetal Heart heart
2 chr4:104021200-104100200 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr4:104029000-104089000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr4:104029800-104089000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr4:104030200-104089600 Weak transcription Hela-S3 cervix
6 chr4:104038200-104095800 Strong transcription Fetal Thymus thymus
7 chr4:104051000-104089200 Weak transcription Placenta Amnion Placenta Amnion
8 chr4:104051000-104092600 Strong transcription HUES48 Cell Line embryonic stem cell
9 chr4:104051400-104089400 Weak transcription Placenta Placenta
10 chr4:104051600-104088800 Weak transcription Duodenum Mucosa Duodenum
11 chr4:104052000-104089200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr4:104052600-104088800 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr4:104055600-104089200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr4:104058200-104118400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr4:104059400-104087400 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr4:104059400-104089000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr4:104064200-104089000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr4:104065000-104113200 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr4:104065600-104088800 Weak transcription Thymus Thymus
20 chr4:104070200-104088800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr4:104070400-104091200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr4:104071000-104089000 Weak transcription H9 Cell Line embryonic stem cell
23 chr4:104071200-104088800 Weak transcription Fetal Intestine Large intestine
24 chr4:104071800-104088800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr4:104072000-104088800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr4:104072200-104088800 Weak transcription Fetal Muscle Leg muscle
27 chr4:104072600-104089200 Weak transcription NHLF lung
28 chr4:104072600-104089400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr4:104073600-104118400 Weak transcription Fetal Kidney kidney
30 chr4:104074800-104088800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr4:104076800-104088800 Weak transcription Fetal Intestine Small intestine
32 chr4:104076800-104088800 Weak transcription Fetal Stomach stomach
33 chr4:104076800-104092000 Strong transcription HUES64 Cell Line embryonic stem cell
34 chr4:104077600-104088600 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr4:104077600-104089000 Weak transcription Fetal Brain Female brain
36 chr4:104077600-104089000 Weak transcription NHDF-Ad bronchial
37 chr4:104077800-104088800 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr4:104077800-104089000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr4:104077800-104089000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr4:104078200-104088800 Weak transcription HepG2 liver
41 chr4:104078400-104088800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr4:104078400-104089600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr4:104078400-104108400 Strong transcription Dnd41 blood
44 chr4:104078800-104088800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr4:104078800-104088800 Weak transcription Fetal Lung lung
46 chr4:104078800-104088800 Weak transcription Fetal Muscle Trunk muscle
47 chr4:104079200-104088800 Weak transcription Muscle Satellite Cultured Cells --
48 chr4:104080000-104089000 Weak transcription Primary B cells from cord blood blood
49 chr4:104080000-104101800 Weak transcription ES-WA7 Cell Line embryonic stem cell
50 chr4:104080200-104088800 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015