The 2.0 version of rSNPBase

Variant report

Variant rs56412006
Chromosome Location chr4:104003993-104003994
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:103997800-104007800 Weak transcription Spleen Spleen
2 chr4:103998000-104007600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr4:103998200-104007000 Weak transcription Lung lung
4 chr4:103998200-104007200 Weak transcription Placenta Amnion Placenta Amnion
5 chr4:103998200-104007200 Weak transcription Thymus Thymus
6 chr4:103998200-104007600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr4:103998200-104007600 Weak transcription Gastric stomach
8 chr4:103998200-104007800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr4:103998200-104008000 Weak transcription H9 Cell Line embryonic stem cell
10 chr4:103998200-104008000 Weak transcription Placenta Placenta
11 chr4:103998200-104010000 Weak transcription Small Intestine intestine
12 chr4:103998200-104011200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr4:103998200-104020400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr4:103998400-104005400 Weak transcription Brain Hippocampus Middle brain
15 chr4:103998400-104005400 Weak transcription Psoas Muscle Psoas
16 chr4:103998400-104006400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr4:103998400-104006400 Weak transcription Primary T cells fromperipheralblood blood
18 chr4:103998400-104006400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr4:103998400-104006400 Weak transcription Brain Substantia Nigra brain
20 chr4:103998400-104006800 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr4:103998400-104006800 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr4:103998400-104007000 Weak transcription Right Ventricle heart
23 chr4:103998400-104007800 Weak transcription Pancreas Pancrea
24 chr4:103998400-104008000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr4:103998400-104008000 Weak transcription Colonic Mucosa Colon
26 chr4:103998400-104008400 Weak transcription Esophagus oesophagus
27 chr4:103998400-104010800 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr4:103998400-104018800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr4:103998600-104005400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr4:103998600-104005600 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr4:103998600-104006400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr4:103998600-104006400 Weak transcription GM12878-XiMat blood
33 chr4:103998600-104006600 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr4:103998600-104006800 Weak transcription H1 Cell Line embryonic stem cell
35 chr4:103998600-104006800 Weak transcription Primary B cells from cord blood blood
36 chr4:103998600-104006800 Weak transcription NHLF lung
37 chr4:103998600-104007000 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr4:103998600-104007400 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr4:103998600-104007400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr4:103998600-104007600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr4:103998600-104007600 Weak transcription Rectal Smooth Muscle rectum
42 chr4:103998600-104007800 Weak transcription Primary monocytes fromperipheralblood blood
43 chr4:103998600-104007800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr4:103998600-104007800 Weak transcription Brain Angular Gyrus brain
45 chr4:103998600-104007800 Weak transcription Brain Anterior Caudate brain
46 chr4:103998600-104007800 Weak transcription HMEC breast
47 chr4:103998600-104007800 Weak transcription NH-A brain
48 chr4:103998600-104008000 Weak transcription Brain Inferior Temporal Lobe brain
49 chr4:103998600-104009600 Weak transcription Primary B cells from peripheral blood blood
50 chr4:103998600-104011200 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015