The 2.0 version of rSNPBase

Variant report

Variant rs17316337
Chromosome Location chr1:63268989-63268990
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63250800-63319000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr1:63251000-63269600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:63251000-63272600 Weak transcription Fetal Muscle Leg muscle
4 chr1:63251000-63274800 Weak transcription Fetal Intestine Small intestine
5 chr1:63251000-63296000 Weak transcription Fetal Thymus thymus
6 chr1:63251000-63317800 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr1:63251000-63327400 Weak transcription Fetal Stomach stomach
8 chr1:63251200-63327400 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:63251400-63275600 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr1:63251800-63273000 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr1:63252000-63269600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:63252000-63284400 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr1:63252800-63272400 Weak transcription Primary T cells from cord blood blood
14 chr1:63257400-63293400 Weak transcription Brain Anterior Caudate brain
15 chr1:63260200-63273000 Weak transcription Brain Inferior Temporal Lobe brain
16 chr1:63261000-63269400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:63261600-63326400 Weak transcription Placenta Placenta
18 chr1:63262800-63276000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr1:63262800-63293000 Weak transcription Brain Substantia Nigra brain
20 chr1:63263000-63273000 Weak transcription Brain Cingulate Gyrus brain
21 chr1:63263400-63274800 Weak transcription Primary T cells fromperipheralblood blood
22 chr1:63264800-63282800 Weak transcription Left Ventricle heart
23 chr1:63265800-63272200 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr1:63266200-63276200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:63266600-63270600 Enhancers Primary B cells from cord blood blood
26 chr1:63266800-63272400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr1:63266800-63284600 Weak transcription Fetal Kidney kidney
28 chr1:63267000-63274600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:63267000-63276000 Weak transcription Fetal Lung lung
30 chr1:63267000-63279800 Weak transcription Rectal Smooth Muscle rectum
31 chr1:63267200-63271400 Weak transcription Primary hematopoietic stem cells blood
32 chr1:63267200-63274400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:63267200-63275800 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr1:63267200-63327000 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr1:63267200-63327400 Weak transcription Colon Smooth Muscle Colon
36 chr1:63267400-63271400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:63267400-63272400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr1:63267400-63272800 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr1:63267400-63274000 Weak transcription GM12878-XiMat blood
40 chr1:63267400-63276000 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr1:63267400-63283400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:63267600-63287200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr1:63267800-63269400 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr1:63267800-63270200 Weak transcription Primary monocytes fromperipheralblood blood
45 chr1:63268000-63278800 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr1:63268200-63270000 Weak transcription Primary B cells from peripheral blood blood
47 chr1:63268200-63272400 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr1:63268400-63269200 Enhancers HUVEC blood vessel
49 chr1:63268400-63297000 Weak transcription Brain Hippocampus Middle brain
50 chr1:63268600-63276600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015