Variant report

Variant rs17446078
Chromosome Location chr18:25629932-25629933
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:25618400-25631600 Weak transcription Fetal Brain Male brain
2 chr18:25625800-25630800 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr18:25625800-25643400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr18:25625800-25650400 Weak transcription Right Atrium heart
5 chr18:25626000-25643200 Weak transcription HUVEC blood vessel
6 chr18:25626200-25630800 Weak transcription Osteobl bone
7 chr18:25627600-25645600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr18:25628200-25630200 Enhancers ES-I3 Cell Line embryonic stem cell
9 chr18:25628400-25630000 Enhancers H9 Cell Line embryonic stem cell
10 chr18:25628400-25630000 Enhancers HUES6 Cell Line embryonic stem cell
11 chr18:25628400-25630000 Enhancers iPS-18 Cell Line embryonic stem cell
12 chr18:25628400-25630000 Enhancers iPS-20b Cell Line embryonic stem cell
13 chr18:25628800-25630000 Enhancers Brain Angular Gyrus brain
14 chr18:25628800-25630400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr18:25629000-25630000 Enhancers Brain Cingulate Gyrus brain
16 chr18:25629000-25630000 Enhancers Brain Germinal Matrix brain
17 chr18:25629000-25630800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr18:25629000-25630800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
19 chr18:25629200-25630200 Enhancers Brain Anterior Caudate brain
20 chr18:25629200-25630200 Strong transcription HSMM muscle
21 chr18:25629200-25630800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr18:25629200-25630800 Enhancers Left Ventricle heart
23 chr18:25629200-25632800 Weak transcription Fetal Brain Female brain
24 chr18:25629400-25630000 Enhancers Brain Substantia Nigra brain
25 chr18:25629400-25630200 Enhancers Brain Hippocampus Middle brain
26 chr18:25629400-25643000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr18:25629600-25630200 Genic enhancers Cortex derived primary cultured neurospheres brain
28 chr18:25629600-25630600 Strong transcription NH-A brain
29 chr18:25629600-25631800 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr18:25629600-25632000 Weak transcription A549 lung
31 chr18:25629800-25630000 Enhancers H1 Cell Line embryonic stem cell
32 chr18:25629800-25630000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr18:25629800-25630200 Weak transcription Fetal Heart heart
34 chr18:25629800-25630400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr18:25629800-25631000 Weak transcription HUES64 Cell Line embryonic stem cell

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