Variant report

Variant rs17450593
Chromosome Location chr1:57473612-57473613
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:57457800-57480400 Weak transcription Fetal Intestine Small intestine
2 chr1:57459000-57474600 Weak transcription Fetal Brain Female brain
3 chr1:57460400-57483000 Weak transcription HUES6 Cell Line embryonic stem cell
4 chr1:57463800-57482200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr1:57466800-57473800 Weak transcription Brain Germinal Matrix brain
6 chr1:57466800-57474000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr1:57468800-57475200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:57468800-57477400 Weak transcription Rectal Smooth Muscle rectum
9 chr1:57469800-57477200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:57471200-57482600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:57472200-57474200 Enhancers Brain Inferior Temporal Lobe brain
12 chr1:57472400-57473800 Enhancers Brain Hippocampus Middle brain
13 chr1:57472600-57474000 Enhancers Brain Substantia Nigra brain
14 chr1:57472600-57484400 Weak transcription Fetal Brain Male brain
15 chr1:57473000-57473800 Enhancers Brain Cingulate Gyrus brain
16 chr1:57473000-57474000 Enhancers Brain Angular Gyrus brain
17 chr1:57473200-57474800 Enhancers Fetal Heart heart
18 chr1:57473200-57477600 Strong transcription Liver Liver
19 chr1:57473400-57474000 Enhancers Fetal Stomach stomach
20 chr1:57473600-57475800 Weak transcription Fetal Intestine Large intestine

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