Variant report

Variant	rs17450894
Chromosome Location	chr6:72213355-72213356
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs17548083	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17548917	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2092531	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs503891	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs530938	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs547136	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830684	chr6:72094842-72282684	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	488 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:72206200-72218600	Weak transcription	Aorta	Aorta
2	chr6:72206600-72213400	Weak transcription	NHLF	lung
3	chr6:72206600-72218400	Weak transcription	Fetal Lung	lung
4	chr6:72210400-72219000	Weak transcription	Fetal Kidney	kidney

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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