Variant report

Variant rs17471429
Chromosome Location chr7:27156961-27156962
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27145800-27162800 Strong transcription Primary hematopoietic stem cells short term culture blood
2 chr7:27146400-27169600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr7:27146800-27159000 Weak transcription Primary hematopoietic stem cells blood
4 chr7:27150000-27158400 Active TSS Aorta Aorta
5 chr7:27151000-27158200 Active TSS Breast Myoepithelial Primary Cells Breast
6 chr7:27151600-27159200 Active TSS Duodenum Smooth Muscle Duodenum
7 chr7:27151800-27157000 Active TSS Right Atrium heart
8 chr7:27152600-27157800 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr7:27152600-27158000 Active TSS Esophagus oesophagus
10 chr7:27152800-27169400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr7:27153200-27157400 Active TSS Stomach Smooth Muscle stomach
12 chr7:27153800-27157400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr7:27154000-27157800 Transcr. at gene 5' and 3' Fetal Stomach stomach
14 chr7:27154200-27158000 Bivalent/Poised TSS Fetal Thymus thymus
15 chr7:27154400-27157000 Active TSS NHLF lung
16 chr7:27154600-27157400 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
17 chr7:27154600-27158600 Transcr. at gene 5' and 3' Fetal Intestine Large intestine
18 chr7:27154800-27158000 Active TSS Colon Smooth Muscle Colon
19 chr7:27155000-27157400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
20 chr7:27155000-27157800 Strong transcription HepG2 liver
21 chr7:27155000-27158000 Bivalent/Poised TSS NH-A brain
22 chr7:27155200-27159400 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr7:27155200-27163600 Weak transcription NHDF-Ad bronchial
24 chr7:27155400-27157000 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr7:27155400-27157600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
26 chr7:27155400-27159800 Genic enhancers Fetal Muscle Leg muscle
27 chr7:27155400-27161600 Weak transcription Muscle Satellite Cultured Cells --
28 chr7:27155600-27157000 Active TSS Rectal Mucosa Donor 29 rectum
29 chr7:27155600-27157600 Weak transcription Small Intestine intestine
30 chr7:27155600-27158000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
31 chr7:27155600-27169400 Weak transcription Hela-S3 cervix
32 chr7:27155800-27157000 Transcr. at gene 5' and 3' A549 lung
33 chr7:27155800-27157200 Transcr. at gene 5' and 3' HUVEC blood vessel
34 chr7:27156000-27157400 Weak transcription Psoas Muscle Psoas
35 chr7:27156000-27158200 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr7:27156200-27158400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr7:27156200-27161600 Weak transcription Gastric stomach
38 chr7:27156200-27169200 Weak transcription Osteobl bone
39 chr7:27156400-27157200 Active TSS Stomach Mucosa stomach
40 chr7:27156400-27158200 Flanking Active TSS HMEC breast
41 chr7:27156400-27158400 Active TSS Duodenum Mucosa Duodenum
42 chr7:27156400-27158600 Flanking Active TSS Colonic Mucosa Colon
43 chr7:27156400-27158600 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
44 chr7:27156600-27157000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr7:27156600-27157000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr7:27156600-27157000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr7:27156600-27157000 Enhancers Fetal Muscle Trunk muscle
48 chr7:27156600-27157000 Active TSS Rectal Smooth Muscle rectum
49 chr7:27156600-27157200 Transcr. at gene 5' and 3' Fetal Kidney kidney
50 chr7:27156600-27157200 Enhancers Spleen Spleen

Quick Search:


  
Input of quick search could be:

what's new

Quick links