Variant report

Variant rs2285721
Chromosome Location chr7:27155353-27155354
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27145800-27162800 Strong transcription Primary hematopoietic stem cells short term culture blood
2 chr7:27146400-27169600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr7:27146800-27159000 Weak transcription Primary hematopoietic stem cells blood
4 chr7:27150000-27158400 Active TSS Aorta Aorta
5 chr7:27151000-27158200 Active TSS Breast Myoepithelial Primary Cells Breast
6 chr7:27151600-27156000 Active TSS Fetal Kidney kidney
7 chr7:27151600-27156800 Bivalent/Poised TSS Fetal Lung lung
8 chr7:27151600-27159200 Active TSS Duodenum Smooth Muscle Duodenum
9 chr7:27151800-27157000 Active TSS Right Atrium heart
10 chr7:27152600-27157800 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr7:27152600-27158000 Active TSS Esophagus oesophagus
12 chr7:27152800-27156800 Active TSS Lung lung
13 chr7:27152800-27169400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr7:27153200-27155400 Bivalent/Poised TSS Pancreatic Islets Pancreatic Islet
15 chr7:27153200-27157400 Active TSS Stomach Smooth Muscle stomach
16 chr7:27153800-27157400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr7:27154000-27157800 Transcr. at gene 5' and 3' Fetal Stomach stomach
18 chr7:27154200-27155400 Bivalent Enhancer H1 Cell Line embryonic stem cell
19 chr7:27154200-27155400 Enhancers Muscle Satellite Cultured Cells --
20 chr7:27154200-27158000 Bivalent/Poised TSS Fetal Thymus thymus
21 chr7:27154400-27156000 Active TSS Psoas Muscle Psoas
22 chr7:27154400-27157000 Active TSS NHLF lung
23 chr7:27154600-27155400 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
24 chr7:27154600-27155400 Flanking Active TSS Hela-S3 cervix
25 chr7:27154600-27155400 Flanking Active TSS Osteobl bone
26 chr7:27154600-27155600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
27 chr7:27154600-27155600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr7:27154600-27155600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
29 chr7:27154600-27156400 Flanking Bivalent TSS/Enh Fetal Intestine Small intestine
30 chr7:27154600-27157400 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
31 chr7:27154600-27158600 Transcr. at gene 5' and 3' Fetal Intestine Large intestine
32 chr7:27154800-27155400 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
33 chr7:27154800-27155400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr7:27154800-27155400 Active TSS Spleen Spleen
35 chr7:27154800-27155600 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
36 chr7:27154800-27155600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
37 chr7:27154800-27155600 Flanking Active TSS Colonic Mucosa Colon
38 chr7:27154800-27155800 Active TSS Rectal Smooth Muscle rectum
39 chr7:27154800-27155800 Active TSS A549 lung
40 chr7:27154800-27156000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr7:27154800-27156000 Flanking Active TSS Fetal Muscle Trunk muscle
42 chr7:27154800-27156000 Active TSS Sigmoid Colon Sigmoid Colon
43 chr7:27154800-27156000 Active TSS Stomach Mucosa stomach
44 chr7:27154800-27156600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr7:27154800-27158000 Active TSS Colon Smooth Muscle Colon
46 chr7:27155000-27155400 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
47 chr7:27155000-27155400 Bivalent Enhancer Ganglion Eminence derived primary cultured neurospheres brain
48 chr7:27155000-27155400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
49 chr7:27155000-27155400 Active TSS Adipose Nuclei Adipose
50 chr7:27155000-27155400 Bivalent Enhancer Placenta Placenta

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