Variant report

Variant rs17471758
Chromosome Location chr7:27157531-27157532
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27145800-27162800 Strong transcription Primary hematopoietic stem cells short term culture blood
2 chr7:27146400-27169600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr7:27146800-27159000 Weak transcription Primary hematopoietic stem cells blood
4 chr7:27150000-27158400 Active TSS Aorta Aorta
5 chr7:27151000-27158200 Active TSS Breast Myoepithelial Primary Cells Breast
6 chr7:27151600-27159200 Active TSS Duodenum Smooth Muscle Duodenum
7 chr7:27152600-27157800 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr7:27152600-27158000 Active TSS Esophagus oesophagus
9 chr7:27152800-27169400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr7:27154000-27157800 Transcr. at gene 5' and 3' Fetal Stomach stomach
11 chr7:27154200-27158000 Bivalent/Poised TSS Fetal Thymus thymus
12 chr7:27154600-27158600 Transcr. at gene 5' and 3' Fetal Intestine Large intestine
13 chr7:27154800-27158000 Active TSS Colon Smooth Muscle Colon
14 chr7:27155000-27157800 Strong transcription HepG2 liver
15 chr7:27155000-27158000 Bivalent/Poised TSS NH-A brain
16 chr7:27155200-27159400 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr7:27155200-27163600 Weak transcription NHDF-Ad bronchial
18 chr7:27155400-27157600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
19 chr7:27155400-27159800 Genic enhancers Fetal Muscle Leg muscle
20 chr7:27155400-27161600 Weak transcription Muscle Satellite Cultured Cells --
21 chr7:27155600-27157600 Weak transcription Small Intestine intestine
22 chr7:27155600-27158000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
23 chr7:27155600-27169400 Weak transcription Hela-S3 cervix
24 chr7:27156000-27158200 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr7:27156200-27158400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr7:27156200-27161600 Weak transcription Gastric stomach
27 chr7:27156200-27169200 Weak transcription Osteobl bone
28 chr7:27156400-27158200 Flanking Active TSS HMEC breast
29 chr7:27156400-27158400 Active TSS Duodenum Mucosa Duodenum
30 chr7:27156400-27158600 Flanking Active TSS Colonic Mucosa Colon
31 chr7:27156400-27158600 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
32 chr7:27156600-27158600 Flanking Active TSS Adipose Nuclei Adipose
33 chr7:27156600-27161600 Weak transcription NHEK skin
34 chr7:27156800-27157600 Transcr. at gene 5' and 3' Fetal Adrenal Gland Adrenal Gland
35 chr7:27156800-27158200 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
36 chr7:27156800-27158600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr7:27157000-27157800 Bivalent/Poised TSS Fetal Lung lung
38 chr7:27157000-27158000 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr7:27157000-27158000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr7:27157000-27158000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr7:27157000-27158600 Bivalent/Poised TSS Fetal Brain Male brain
42 chr7:27157000-27158600 Flanking Active TSS Rectal Smooth Muscle rectum
43 chr7:27157000-27159600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr7:27157200-27157600 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
45 chr7:27157200-27157600 Active TSS A549 lung
46 chr7:27157200-27157800 Weak transcription Stomach Mucosa stomach
47 chr7:27157200-27157800 Weak transcription Spleen Spleen
48 chr7:27157200-27158000 Active TSS Fetal Kidney kidney
49 chr7:27157200-27158200 Active TSS Skeletal Muscle Male skeletal muscle
50 chr7:27157200-27158600 Active TSS Lung lung

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