Variant report

Variant rs17471751
Chromosome Location chr7:27151515-27151516
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27145600-27152400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr7:27145800-27162800 Strong transcription Primary hematopoietic stem cells short term culture blood
3 chr7:27146400-27169600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr7:27146800-27159000 Weak transcription Primary hematopoietic stem cells blood
5 chr7:27148000-27152600 Weak transcription Small Intestine intestine
6 chr7:27149000-27153200 Enhancers NHDF-Ad bronchial
7 chr7:27149800-27151600 Enhancers Sigmoid Colon Sigmoid Colon
8 chr7:27149800-27153000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr7:27150000-27151800 Flanking Active TSS HMEC breast
10 chr7:27150000-27152000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr7:27150000-27153000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr7:27150000-27153000 Flanking Active TSS NHEK skin
13 chr7:27150000-27153400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr7:27150000-27158400 Active TSS Aorta Aorta
15 chr7:27150200-27151800 Flanking Active TSS Osteobl bone
16 chr7:27150400-27151600 Bivalent Enhancer Fetal Muscle Leg muscle
17 chr7:27150400-27152200 Flanking Active TSS A549 lung
18 chr7:27150400-27152600 Enhancers Muscle Satellite Cultured Cells --
19 chr7:27150400-27152600 Enhancers Colonic Mucosa Colon
20 chr7:27150400-27152600 Enhancers Rectal Mucosa Donor 31 rectum
21 chr7:27150400-27152600 Enhancers Hela-S3 cervix
22 chr7:27150400-27152800 Weak transcription Pancreas Pancrea
23 chr7:27150400-27153000 Flanking Active TSS HUVEC blood vessel
24 chr7:27150400-27154600 Bivalent/Poised TSS NH-A brain
25 chr7:27150600-27151600 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
26 chr7:27150600-27151600 Flanking Bivalent TSS/Enh Fetal Lung lung
27 chr7:27150600-27151600 Flanking Active TSS NHLF lung
28 chr7:27150800-27151600 Enhancers Placenta Amnion Placenta Amnion
29 chr7:27150800-27151600 Enhancers Psoas Muscle Psoas
30 chr7:27150800-27152000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr7:27150800-27152600 Enhancers Rectal Mucosa Donor 29 rectum
32 chr7:27151000-27151600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr7:27151000-27151600 Flanking Active TSS Fetal Kidney kidney
34 chr7:27151000-27151800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr7:27151000-27151800 Enhancers Skeletal Muscle Female skeletal muscle
36 chr7:27151000-27152400 Enhancers Adipose Nuclei Adipose
37 chr7:27151000-27152400 Weak transcription Duodenum Mucosa Duodenum
38 chr7:27151000-27152600 Weak transcription Esophagus oesophagus
39 chr7:27151000-27152800 Weak transcription Lung lung
40 chr7:27151000-27152800 Weak transcription HSMMtube muscle
41 chr7:27151000-27158200 Active TSS Breast Myoepithelial Primary Cells Breast
42 chr7:27151200-27151800 Weak transcription Right Atrium heart
43 chr7:27151200-27152000 Enhancers Stomach Mucosa stomach
44 chr7:27151200-27152600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr7:27151200-27152600 Weak transcription Fetal Muscle Trunk muscle
46 chr7:27151200-27152600 Weak transcription HSMM muscle
47 chr7:27151200-27152800 Active TSS Fetal Intestine Large intestine
48 chr7:27151200-27152800 Bivalent/Poised TSS Fetal Intestine Small intestine
49 chr7:27151200-27153000 Bivalent/Poised TSS Fetal Brain Male brain
50 chr7:27151200-27153000 Weak transcription Spleen Spleen

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