Variant report

Variant rs17471958
Chromosome Location chr7:27174741-27174742
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27171200-27175400 Enhancers NHLF lung
2 chr7:27171200-27175600 Enhancers Fetal Stomach stomach
3 chr7:27171200-27175800 Enhancers Fetal Intestine Large intestine
4 chr7:27171200-27176400 Weak transcription Lung lung
5 chr7:27171200-27181400 Weak transcription Esophagus oesophagus
6 chr7:27171400-27174800 Enhancers Rectal Smooth Muscle rectum
7 chr7:27171400-27175200 Enhancers A549 lung
8 chr7:27171400-27175400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr7:27171400-27175800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr7:27171400-27175800 Weak transcription HSMMtube muscle
11 chr7:27172600-27178400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr7:27173000-27174800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr7:27173000-27174800 Enhancers Skeletal Muscle Male skeletal muscle
14 chr7:27173000-27174800 Enhancers Stomach Mucosa stomach
15 chr7:27173000-27175600 Enhancers Duodenum Smooth Muscle Duodenum
16 chr7:27173000-27175800 Genic enhancers Fetal Muscle Leg muscle
17 chr7:27173000-27176400 Enhancers Adipose Nuclei Adipose
18 chr7:27173000-27176800 Enhancers NHEK skin
19 chr7:27173200-27175200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr7:27173200-27175600 Enhancers HMEC breast
21 chr7:27173400-27174800 Enhancers HSMM muscle
22 chr7:27173400-27175400 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr7:27173400-27175800 Enhancers Osteobl bone
24 chr7:27173400-27177600 Enhancers Muscle Satellite Cultured Cells --
25 chr7:27173600-27175000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr7:27173600-27175600 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
27 chr7:27173600-27177600 Enhancers Primary hematopoietic stem cells blood
28 chr7:27173800-27175200 Enhancers Primary monocytes fromperipheralblood blood
29 chr7:27173800-27175400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr7:27173800-27175400 Enhancers Rectal Mucosa Donor 31 rectum
31 chr7:27173800-27175800 Enhancers NHDF-Ad bronchial
32 chr7:27173800-27176400 Weak transcription Psoas Muscle Psoas
33 chr7:27173800-27178400 Enhancers Fetal Intestine Small intestine
34 chr7:27173800-27178600 Enhancers Colon Smooth Muscle Colon
35 chr7:27173800-27179200 Genic enhancers Primary hematopoietic stem cells short term culture blood
36 chr7:27174000-27174800 Active TSS Stomach Smooth Muscle stomach
37 chr7:27174000-27175000 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr7:27174000-27175600 Enhancers Monocytes-CD14+_RO01746 blood
39 chr7:27174000-27175800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr7:27174000-27175800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr7:27174000-27176000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr7:27174200-27175400 Enhancers HepG2 liver
43 chr7:27174200-27175600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr7:27174200-27175600 Enhancers Primary T cells from cord blood blood
45 chr7:27174400-27174800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr7:27174400-27175000 Genic enhancers Rectal Mucosa Donor 29 rectum
47 chr7:27174400-27175400 Bivalent Enhancer Fetal Lung lung
48 chr7:27174400-27175400 Enhancers HUVEC blood vessel
49 chr7:27174400-27175600 Weak transcription Colonic Mucosa Colon
50 chr7:27174400-27175600 Weak transcription Sigmoid Colon Sigmoid Colon

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