Variant report
| Variant | rs17489344 |
|---|---|
| Chromosome Location | chr12:40455593-40455594 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:40449200-40457000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 2 | chr12:40452000-40458600 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 3 | chr12:40452800-40460000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 4 | chr12:40453000-40455600 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 5 | chr12:40453000-40457000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 6 | chr12:40453000-40457400 | Weak transcription | Brain Anterior Caudate | brain |
| 7 | chr12:40453200-40456600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 8 | chr12:40453200-40457200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 9 | chr12:40453400-40459600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 10 | chr12:40453600-40457000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 11 | chr12:40453600-40459400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 12 | chr12:40453800-40457400 | Weak transcription | Brain Germinal Matrix | brain |
| 13 | chr12:40453800-40487400 | Weak transcription | Left Ventricle | heart |
| 14 | chr12:40454200-40457000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 15 | chr12:40454800-40455600 | Enhancers | Pancreatic Islets | Pancreatic Islet |
| 16 | chr12:40455000-40457200 | Enhancers | Colon Smooth Muscle | Colon |
| 17 | chr12:40455200-40456000 | Enhancers | Rectal Smooth Muscle | rectum |
