Variant report
| Variant | rs2708440 |
|---|---|
| Chromosome Location | chr12:40623730-40623731 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:40619400-40634600 | Weak transcription | Spleen | Spleen |
| 2 | chr12:40619400-40644400 | Weak transcription | Gastric | stomach |
| 3 | chr12:40619600-40636400 | Weak transcription | Fetal Muscle Leg | muscle |
| 4 | chr12:40619600-40661000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 5 | chr12:40619600-40678400 | Weak transcription | Right Ventricle | heart |
| 6 | chr12:40619800-40658800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 7 | chr12:40620400-40630000 | Weak transcription | Ovary | ovary |
| 8 | chr12:40620400-40644200 | Weak transcription | Brain Angular Gyrus | brain |
| 9 | chr12:40620800-40623800 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 10 | chr12:40620800-40626600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 11 | chr12:40620800-40627600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 12 | chr12:40620800-40629200 | Weak transcription | Stomach Mucosa | stomach |
| 13 | chr12:40620800-40629600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 14 | chr12:40620800-40634800 | Weak transcription | Lung | lung |
| 15 | chr12:40620800-40634800 | Weak transcription | Pancreas | Pancrea |
| 16 | chr12:40620800-40644200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 17 | chr12:40620800-40648000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 18 | chr12:40620800-40659200 | Weak transcription | Brain Anterior Caudate | brain |
| 19 | chr12:40620800-40704200 | Weak transcription | Esophagus | oesophagus |
| 20 | chr12:40621000-40629200 | Weak transcription | Adipose Nuclei | Adipose |
| 21 | chr12:40621000-40630200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 22 | chr12:40621000-40632000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 23 | chr12:40621000-40643800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 24 | chr12:40621000-40659800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 25 | chr12:40621000-40661200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 26 | chr12:40621200-40631800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 27 | chr12:40621200-40632000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 28 | chr12:40621400-40625800 | Weak transcription | Fetal Kidney | kidney |
| 29 | chr12:40621400-40629000 | Weak transcription | Aorta | Aorta |
| 30 | chr12:40621400-40632400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 31 | chr12:40622000-40623800 | Enhancers | A549 | lung |
| 32 | chr12:40622400-40624400 | Enhancers | Liver | Liver |
| 33 | chr12:40622800-40623800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 34 | chr12:40622800-40626400 | Genic enhancers | Primary neutrophils fromperipheralblood | blood |
| 35 | chr12:40622800-40629200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 36 | chr12:40622800-40661000 | Weak transcription | Colon Smooth Muscle | Colon |
| 37 | chr12:40622800-40708800 | Weak transcription | Left Ventricle | heart |
| 38 | chr12:40623000-40623800 | Weak transcription | Right Atrium | heart |
| 39 | chr12:40623000-40624000 | Active TSS | GM12878-XiMat | blood |
| 40 | chr12:40623200-40624000 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 41 | chr12:40623200-40624200 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
| 42 | chr12:40623600-40624000 | Transcr. at gene 5' and 3' | Primary monocytes fromperipheralblood | blood |
| 43 | chr12:40623600-40624200 | Active TSS | Pancreatic Islets | Pancreatic Islet |
