The 2.0 version of rSNPBase

Variant report

Variant rs17496670
Chromosome Location chr7:40119328-40119329
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:40028000-40127800 Weak transcription Colonic Mucosa Colon
2 chr7:40043600-40127800 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr7:40055600-40126400 Weak transcription Aorta Aorta
4 chr7:40055800-40127600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr7:40055800-40127600 Weak transcription Rectal Smooth Muscle rectum
6 chr7:40056200-40128600 Weak transcription A549 lung
7 chr7:40058600-40126800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr7:40059000-40125200 Weak transcription Fetal Kidney kidney
9 chr7:40072000-40130400 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr7:40077200-40127800 Weak transcription Esophagus oesophagus
11 chr7:40080200-40132400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr7:40082000-40127800 Weak transcription Pancreas Pancrea
13 chr7:40082600-40128200 Weak transcription Spleen Spleen
14 chr7:40083400-40127400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr7:40086400-40127800 Weak transcription Thymus Thymus
16 chr7:40092600-40127600 Weak transcription Brain Substantia Nigra brain
17 chr7:40093800-40127600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr7:40094800-40127800 Weak transcription Placenta Amnion Placenta Amnion
19 chr7:40095800-40127800 Weak transcription Fetal Brain Female brain
20 chr7:40096600-40126600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr7:40096800-40126600 Weak transcription Lung lung
22 chr7:40097200-40127600 Weak transcription HSMMtube muscle
23 chr7:40097200-40132600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr7:40097200-40132600 Weak transcription Right Ventricle heart
25 chr7:40098200-40132400 Weak transcription Psoas Muscle Psoas
26 chr7:40098400-40119400 Weak transcription Small Intestine intestine
27 chr7:40098600-40127600 Weak transcription Brain Hippocampus Middle brain
28 chr7:40099000-40119400 Weak transcription Brain Anterior Caudate brain
29 chr7:40099000-40126600 Weak transcription Brain Angular Gyrus brain
30 chr7:40099200-40123600 Weak transcription Ovary ovary
31 chr7:40099800-40132600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr7:40103000-40119400 Weak transcription H1 Cell Line embryonic stem cell
33 chr7:40103000-40126200 Weak transcription Primary hematopoietic stem cells blood
34 chr7:40103000-40126400 Weak transcription HUVEC blood vessel
35 chr7:40103000-40127600 Weak transcription Stomach Smooth Muscle stomach
36 chr7:40103000-40127600 Weak transcription NHEK skin
37 chr7:40103000-40131400 Weak transcription NHLF lung
38 chr7:40103200-40126800 Weak transcription Muscle Satellite Cultured Cells --
39 chr7:40103600-40126600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr7:40104000-40126600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr7:40104400-40120000 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr7:40104400-40127600 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr7:40105600-40126600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr7:40106000-40127600 Weak transcription Hela-S3 cervix
45 chr7:40106000-40127800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr7:40106000-40131400 Weak transcription HMEC breast
47 chr7:40106800-40127800 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr7:40107000-40120600 Weak transcription Dnd41 blood
49 chr7:40107000-40127800 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr7:40107200-40119400 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015