Variant report

Variant rs17500835
Chromosome Location chr7:27179039-27179040
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27171200-27181400 Weak transcription Esophagus oesophagus
2 chr7:27173800-27179200 Genic enhancers Primary hematopoietic stem cells short term culture blood
3 chr7:27175600-27179200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr7:27175800-27184800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
5 chr7:27176600-27180800 Weak transcription HepG2 liver
6 chr7:27176800-27179600 Enhancers Adipose Nuclei Adipose
7 chr7:27177000-27180200 Active TSS Fetal Intestine Large intestine
8 chr7:27177200-27181400 Weak transcription Psoas Muscle Psoas
9 chr7:27177600-27179200 Genic enhancers Primary hematopoietic stem cells blood
10 chr7:27177600-27179200 Active TSS Stomach Smooth Muscle stomach
11 chr7:27177600-27179400 Weak transcription Muscle Satellite Cultured Cells --
12 chr7:27177600-27183200 Active TSS Rectal Mucosa Donor 29 rectum
13 chr7:27177600-27184400 Active TSS Duodenum Smooth Muscle Duodenum
14 chr7:27177800-27180200 Active TSS Breast Myoepithelial Primary Cells Breast
15 chr7:27177800-27180400 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr7:27177800-27181800 Flanking Active TSS HUVEC blood vessel
17 chr7:27178000-27179600 Active TSS NHLF lung
18 chr7:27178200-27179200 Flanking Active TSS HMEC breast
19 chr7:27178200-27180400 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr7:27178200-27180800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr7:27178200-27181400 Active TSS Colonic Mucosa Colon
22 chr7:27178400-27179800 Active TSS Sigmoid Colon Sigmoid Colon
23 chr7:27178400-27180200 Active TSS Rectal Mucosa Donor 31 rectum
24 chr7:27178400-27180400 Active TSS Rectal Smooth Muscle rectum
25 chr7:27178400-27181200 Weak transcription A549 lung
26 chr7:27178600-27179400 Weak transcription Colon Smooth Muscle Colon
27 chr7:27178600-27179600 Active TSS Fetal Kidney kidney
28 chr7:27178600-27179600 Weak transcription Osteobl bone
29 chr7:27178600-27179800 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
30 chr7:27178600-27180000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr7:27178600-27180000 Active TSS NHEK skin
32 chr7:27178600-27183000 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
33 chr7:27178800-27179200 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
34 chr7:27178800-27179400 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr7:27178800-27179400 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
36 chr7:27178800-27179400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr7:27178800-27179400 Bivalent Enhancer Placenta Placenta
38 chr7:27178800-27179600 Bivalent Enhancer H1 Cell Line embryonic stem cell
39 chr7:27178800-27179600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
40 chr7:27178800-27179600 Active TSS Duodenum Mucosa Duodenum
41 chr7:27178800-27179600 Bivalent/Poised TSS Fetal Stomach stomach
42 chr7:27178800-27179800 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
43 chr7:27178800-27179800 Active TSS Small Intestine intestine
44 chr7:27178800-27180000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr7:27178800-27180400 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr7:27178800-27181200 Strong transcription NHDF-Ad bronchial
47 chr7:27179000-27179200 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
48 chr7:27179000-27179200 Flanking Active TSS Fetal Intestine Small intestine
49 chr7:27179000-27179200 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
50 chr7:27179000-27179200 Enhancers Spleen Spleen

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