Variant report

Variant rs17500863
Chromosome Location chr7:27185520-27185521
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27180600-27185600 Active TSS Breast Myoepithelial Primary Cells Breast
2 chr7:27181600-27185800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr7:27181800-27190400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
4 chr7:27182200-27186000 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr7:27183000-27186400 Transcr. at gene 5' and 3' Rectal Mucosa Donor 31 rectum
6 chr7:27183200-27185600 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
7 chr7:27183200-27186000 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
8 chr7:27183200-27186200 Weak transcription Psoas Muscle Psoas
9 chr7:27183200-27186800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr7:27183200-27186800 Strong transcription Dnd41 blood
11 chr7:27183400-27185800 Strong transcription Skeletal Muscle Male skeletal muscle
12 chr7:27183400-27186400 Strong transcription Osteobl bone
13 chr7:27183400-27186600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr7:27183400-27187200 Weak transcription HSMMtube muscle
15 chr7:27183400-27187800 Weak transcription HepG2 liver
16 chr7:27183600-27185800 Flanking Active TSS HMEC breast
17 chr7:27183600-27186000 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr7:27183600-27186000 Transcr. at gene 5' and 3' Adipose Nuclei Adipose
19 chr7:27183600-27186400 Strong transcription Skeletal Muscle Female skeletal muscle
20 chr7:27183600-27190400 Flanking Active TSS HUVEC blood vessel
21 chr7:27183800-27186400 Strong transcription Muscle Satellite Cultured Cells --
22 chr7:27183800-27187400 Weak transcription Aorta Aorta
23 chr7:27183800-27187800 Weak transcription Hela-S3 cervix
24 chr7:27184000-27185800 Active TSS Fetal Kidney kidney
25 chr7:27184000-27188600 Weak transcription A549 lung
26 chr7:27184200-27185800 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
27 chr7:27184200-27185800 Transcr. at gene 5' and 3' NHEK skin
28 chr7:27184200-27186200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr7:27184200-27186600 Weak transcription NHDF-Ad bronchial
30 chr7:27184200-27186800 Genic enhancers Sigmoid Colon Sigmoid Colon
31 chr7:27184400-27186000 Active TSS Lung lung
32 chr7:27184600-27188200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
33 chr7:27184800-27185600 Strong transcription Colon Smooth Muscle Colon
34 chr7:27184800-27185600 Enhancers Pancreas Pancrea
35 chr7:27185000-27185600 Bivalent Enhancer iPS DF 19.11 Cell Line embryonic stem cell
36 chr7:27185000-27185600 Bivalent/Poised TSS Fetal Intestine Small intestine
37 chr7:27185000-27185600 Bivalent/Poised TSS Fetal Lung lung
38 chr7:27185200-27185600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr7:27185200-27185800 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
40 chr7:27185200-27187000 Genic enhancers Primary hematopoietic stem cells blood
41 chr7:27185400-27185600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr7:27185400-27185600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr7:27185400-27185600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr7:27185400-27185600 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
45 chr7:27185400-27185600 Active TSS NHLF lung
46 chr7:27185400-27185800 Flanking Active TSS Colonic Mucosa Colon
47 chr7:27185400-27185800 Bivalent/Poised TSS Stomach Smooth Muscle stomach
48 chr7:27185400-27186000 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr7:27185400-27186200 Bivalent/Poised TSS Fetal Stomach stomach
50 chr7:27185400-27186200 Weak transcription Rectal Smooth Muscle rectum

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