The 2.0 version of rSNPBase

Variant report

Variant rs1750493
Chromosome Location chr1:85224368-85224369
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85204200-85230400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:85216400-85224400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr1:85216800-85225000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr1:85216800-85230000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:85217000-85224600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr1:85217000-85224600 Weak transcription HMEC breast
7 chr1:85217600-85224400 Weak transcription Right Atrium heart
8 chr1:85218200-85226800 Enhancers Fetal Brain Male brain
9 chr1:85219400-85224400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr1:85219400-85224400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:85219400-85224400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:85219400-85224600 Weak transcription Brain Anterior Caudate brain
13 chr1:85219400-85224800 Weak transcription Primary B cells from peripheral blood blood
14 chr1:85220200-85224400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:85220400-85224600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr1:85222600-85224400 Enhancers HUES6 Cell Line embryonic stem cell
17 chr1:85222800-85224600 Enhancers Fetal Brain Female brain
18 chr1:85223200-85224400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:85223600-85224600 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr1:85223600-85224800 Enhancers Brain Hippocampus Middle brain
21 chr1:85223600-85228000 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr1:85223800-85224800 Weak transcription H1 Cell Line embryonic stem cell
23 chr1:85223800-85224800 Enhancers Brain Germinal Matrix brain
24 chr1:85224000-85224400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:85224000-85224400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
26 chr1:85224000-85224600 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr1:85224000-85225400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:85224200-85224400 Enhancers Brain Inferior Temporal Lobe brain
29 chr1:85224200-85224400 Enhancers Duodenum Mucosa Duodenum
30 chr1:85224200-85224400 Enhancers Pancreatic Islets Pancreatic Islet
31 chr1:85224200-85224400 Enhancers Skeletal Muscle Female skeletal muscle
32 chr1:85224200-85224400 Flanking Active TSS NH-A brain
33 chr1:85224200-85224600 Enhancers Brain Angular Gyrus brain
34 chr1:85224200-85224600 Flanking Active TSS Fetal Heart heart
35 chr1:85224200-85224600 Enhancers HSMM muscle
36 chr1:85224200-85224600 Enhancers NHDF-Ad bronchial
37 chr1:85224200-85224800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
38 chr1:85224200-85224800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:85224200-85224800 Enhancers Brain Substantia Nigra brain
40 chr1:85224200-85224800 Enhancers Ovary ovary
41 chr1:85224200-85225000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr1:85224200-85225200 Flanking Active TSS HSMMtube muscle
43 chr1:85224200-85225200 Flanking Active TSS NHLF lung
44 chr1:85224200-85225400 Flanking Active TSS Osteobl bone
45 chr1:85224200-85229400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr1:85224200-85229400 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015