Variant report
| Variant | rs17543624 |
|---|---|
| Chromosome Location | chr12:32998967-32998968 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:32941800-33033400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 2 | chr12:32943800-33026800 | Weak transcription | Fetal Kidney | kidney |
| 3 | chr12:32949200-33007800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 4 | chr12:32972000-33029000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 5 | chr12:32974200-33030400 | Weak transcription | Right Ventricle | heart |
| 6 | chr12:32974600-33004400 | Weak transcription | Ovary | ovary |
| 7 | chr12:32975800-33020000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 8 | chr12:32992000-33007200 | Weak transcription | Stomach Mucosa | stomach |
| 9 | chr12:32993000-33000000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 10 | chr12:32993000-33002200 | Weak transcription | Gastric | stomach |
| 11 | chr12:32993000-33030400 | Weak transcription | Colonic Mucosa | Colon |
| 12 | chr12:32993400-33013600 | Weak transcription | Pancreas | Pancrea |
| 13 | chr12:32993600-32999000 | Weak transcription | HepG2 | liver |
| 14 | chr12:32993800-33002200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 15 | chr12:32993800-33018000 | Weak transcription | Fetal Stomach | stomach |
| 16 | chr12:32994200-32999000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 17 | chr12:32994200-33002600 | Weak transcription | Placenta | Placenta |
| 18 | chr12:32994800-33000400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 19 | chr12:32995000-32999000 | Weak transcription | Liver | Liver |
| 20 | chr12:32995200-32999200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 21 | chr12:32995200-32999400 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 22 | chr12:32995200-32999600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 23 | chr12:32996200-32999200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 24 | chr12:32996400-33005800 | Weak transcription | Left Ventricle | heart |
| 25 | chr12:32996600-32999800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 26 | chr12:32996800-33000200 | Weak transcription | NHEK | skin |
| 27 | chr12:32996800-33001000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 28 | chr12:32996800-33002400 | Weak transcription | HMEC | breast |
| 29 | chr12:32996800-33003600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 30 | chr12:32997000-33000800 | Enhancers | Fetal Heart | heart |
| 31 | chr12:32997200-32999800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 32 | chr12:32997200-33002200 | Weak transcription | Fetal Intestine Large | intestine |
| 33 | chr12:32997200-33003600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 34 | chr12:32997400-33003600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 35 | chr12:32997400-33004000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 36 | chr12:32997600-33000200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 37 | chr12:32997600-33002600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 38 | chr12:32997800-33000400 | Weak transcription | Fetal Intestine Small | intestine |
| 39 | chr12:32997800-33002400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 40 | chr12:32997800-33003600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 41 | chr12:32997800-33003800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 42 | chr12:32997800-33044400 | Weak transcription | Hela-S3 | cervix |
| 43 | chr12:32997800-33046000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 44 | chr12:32998000-32999200 | Weak transcription | Brain Germinal Matrix | brain |
| 45 | chr12:32998200-32999000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 46 | chr12:32998200-32999000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 47 | chr12:32998600-33004200 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 48 | chr12:32998800-33005200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
