Variant report
| Variant | rs17543896 |
|---|---|
| Chromosome Location | chr12:33023655-33023656 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:32941800-33033400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 2 | chr12:32943800-33026800 | Weak transcription | Fetal Kidney | kidney |
| 3 | chr12:32972000-33029000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 4 | chr12:32974200-33030400 | Weak transcription | Right Ventricle | heart |
| 5 | chr12:32993000-33030400 | Weak transcription | Colonic Mucosa | Colon |
| 6 | chr12:32997800-33044400 | Weak transcription | Hela-S3 | cervix |
| 7 | chr12:32997800-33046000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 8 | chr12:33003800-33030400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 9 | chr12:33004000-33030400 | Weak transcription | Gastric | stomach |
| 10 | chr12:33004200-33028800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 11 | chr12:33012000-33029000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 12 | chr12:33012000-33031000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 13 | chr12:33014800-33030400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 14 | chr12:33014800-33041200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 15 | chr12:33017000-33030400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 16 | chr12:33017000-33030600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 17 | chr12:33018400-33029200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 18 | chr12:33018600-33026000 | Weak transcription | Esophagus | oesophagus |
| 19 | chr12:33019200-33023800 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 20 | chr12:33019200-33027400 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 21 | chr12:33019600-33024000 | Strong transcription | HMEC | breast |
| 22 | chr12:33019600-33027200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 23 | chr12:33020200-33032600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 24 | chr12:33020400-33026800 | Weak transcription | HepG2 | liver |
| 25 | chr12:33020400-33029600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 26 | chr12:33020400-33030600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 27 | chr12:33021600-33024000 | Strong transcription | NHEK | skin |
| 28 | chr12:33021800-33024600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 29 | chr12:33022000-33023800 | Enhancers | Fetal Heart | heart |
| 30 | chr12:33022000-33028400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 31 | chr12:33022200-33024000 | Weak transcription | Left Ventricle | heart |
| 32 | chr12:33022200-33025400 | Weak transcription | Placenta | Placenta |
| 33 | chr12:33022200-33025800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 34 | chr12:33022200-33028200 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 35 | chr12:33022200-33028800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 36 | chr12:33022200-33028800 | Weak transcription | Liver | Liver |
| 37 | chr12:33022200-33030600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 38 | chr12:33022200-33033400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 39 | chr12:33022400-33030400 | Weak transcription | Pancreas | Pancrea |
| 40 | chr12:33022600-33028800 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 41 | chr12:33022800-33024000 | Genic enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 42 | chr12:33022800-33024400 | Enhancers | Stomach Mucosa | stomach |
| 43 | chr12:33023000-33024200 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 44 | chr12:33023000-33024200 | Enhancers | Fetal Intestine Large | intestine |
| 45 | chr12:33023000-33030400 | Weak transcription | Fetal Stomach | stomach |
| 46 | chr12:33023200-33023800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 47 | chr12:33023200-33024600 | Weak transcription | Fetal Intestine Small | intestine |
| 48 | chr12:33023200-33025000 | Genic enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 49 | chr12:33023200-33025600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 50 | chr12:33023400-33025000 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
