The 2.0 version of rSNPBase

Variant report

Variant rs17550514
Chromosome Location chr4:99823705-99823706
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99792400-99825000 Weak transcription Gastric stomach
2 chr4:99796000-99826400 Weak transcription Right Ventricle heart
3 chr4:99797000-99826600 Weak transcription Brain Cingulate Gyrus brain
4 chr4:99798600-99824400 Strong transcription HUES64 Cell Line embryonic stem cell
5 chr4:99800600-99824200 Strong transcription Primary B cells from peripheral blood blood
6 chr4:99801600-99829400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr4:99802200-99824000 Strong transcription Primary T helper cells PMA-I stimulated --
8 chr4:99802600-99823800 Strong transcription Fetal Thymus thymus
9 chr4:99802600-99824400 Strong transcription Dnd41 blood
10 chr4:99802800-99824600 Weak transcription Pancreas Pancrea
11 chr4:99802800-99830200 Weak transcription Ovary ovary
12 chr4:99802800-99849000 Weak transcription Aorta Aorta
13 chr4:99803000-99825000 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr4:99803200-99824200 Weak transcription Placenta Amnion Placenta Amnion
15 chr4:99804400-99848800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr4:99804600-99838400 Weak transcription Esophagus oesophagus
17 chr4:99805200-99832000 Weak transcription Spleen Spleen
18 chr4:99807200-99849000 Weak transcription Colonic Mucosa Colon
19 chr4:99807400-99826400 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr4:99807600-99824000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr4:99807800-99832000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr4:99808000-99841400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr4:99808600-99830600 Weak transcription H9 Cell Line embryonic stem cell
24 chr4:99808600-99849000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr4:99812200-99826400 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr4:99812600-99823800 Weak transcription Fetal Heart heart
27 chr4:99812800-99824400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr4:99813400-99825800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr4:99814000-99823800 Strong transcription iPS-20b Cell Line embryonic stem cell
30 chr4:99815800-99824600 Weak transcription Right Atrium heart
31 chr4:99815800-99848200 Weak transcription Stomach Smooth Muscle stomach
32 chr4:99816000-99825200 Weak transcription Small Intestine intestine
33 chr4:99816600-99824000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr4:99816600-99824800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr4:99816600-99826400 Weak transcription NHDF-Ad bronchial
36 chr4:99816600-99831200 Weak transcription Brain Anterior Caudate brain
37 chr4:99816600-99847200 Weak transcription Fetal Brain Male brain
38 chr4:99817000-99825000 Weak transcription Rectal Smooth Muscle rectum
39 chr4:99817000-99825400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr4:99817000-99830800 Weak transcription Brain Germinal Matrix brain
41 chr4:99818200-99824600 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr4:99818200-99825000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr4:99818400-99825600 Weak transcription Lung lung
44 chr4:99819000-99831000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr4:99819200-99829400 Weak transcription Fetal Brain Female brain
46 chr4:99819600-99826400 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr4:99820600-99823800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
48 chr4:99820600-99826800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr4:99821000-99824200 Strong transcription Primary T regulatory cells fromperipheralblood blood
50 chr4:99821800-99824200 Strong transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015